Regulog PdxR - Alcaligenaceae

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Pyridoxine/pyridoxal homeostasis
Effector:
Phylum:	Proteobacteria/Beta
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 2 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Bordetella avium 197N	1	1
Bordetella bronchiseptica RB50	2	1
Bordetella petrii DSM 12804

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes				Function

CRON 1.
PF03594	* Bordetella avium 197N Site: position = -109 score = 13.6213 sequence = AATTGGCCGG-(13)-AAATGGATGG-(6)-CAGTCCATTT Gene: BAV1501: Putative pyridoxine transport protein	* Bordetella bronchiseptica RB50 Site: position = -114 score = 9.5372 sequence = AAGTGGTCTG-(13)-ATGTGGCATG-(6)-CCTGCCACAT Gene: BB0709: Putative pyridoxine transport protein	Bordetella petrii DSM 12804	Putative pyridoxine transport protein
glyA	Bordetella avium 197N	Bordetella bronchiseptica RB50 Gene: BB0708: Serine hydroxymethyltransferase (EC 2.1.2.1)	Bordetella petrii DSM 12804	Serine hydroxymethyltransferase (EC 2.1.2.1)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --