Regulog TrpR - Francisellaceae
| Regulator type: | Transcription factor |
| Regulator family: | TrpR |
| Regulation mode: | repressor |
| Biological process: | Tryptophan biosynthesis |
| Effector: | Tryptophan |
| Phylum: | Proteobacteria/Gamma |
| Visualization: | |
|
Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - TrpR
- By taxonomy - Francisellaceae
- By TF family - TrpR
- By effector - Tryptophan
- By pathway - Tryptophan biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Francisella novicida FTE | 10 | 1 |
| Francisella philomiragia subsp. philomiragia ATCC 25017 | 7 | 1 |
| Francisella tularensis subsp. tularensis SCHU S4 | 2 | 1 |
| Genes | Function | |||
|---|---|---|---|---|
| CRON 1. | ||||
| trpR |
*
Francisella novicida FTE Site: position = -46 score = 7.10523 sequence = TGTAATGGTGTAACATTACA Gene: FTE_0288: trp operon repressor |
*
Francisella philomiragia subsp. philomiragia ATCC 25017 Site: position = -45 score = 7.002 sequence = TGTAATGATGTACCATTACA Gene: Fphi_0840: trp operon repressor |
*
Francisella tularensis subsp. tularensis SCHU S4 Site: position = -46 score = 7.22039 sequence = TGTAATGGTATAACATTACA Gene: FTT_1803c: trp operon repressor |
trp operon repressor |
| trpE |
Gene: FTE_0287: Anthranilate synthase, aminase component (EC 4.1.3.27) |
Gene: Fphi_0839: Anthranilate synthase, aminase component (EC 4.1.3.27) |
Gene: FTT_1802c: Anthranilate synthase, aminase component (EC 4.1.3.27) |
Anthranilate synthase, aminase component (EC 4.1.3.27) |
| trpD_a |
Gene: FTE_0286: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) |
Gene: Fphi_0838: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) |
|
Anthranilate synthase, amidotransferase component (EC 4.1.3.27) |
| trpD_b |
Gene: FTE_0285: Anthranilate phosphoribosyltransferase (EC 2.4.2.18) |
Gene: Fphi_0837: Anthranilate phosphoribosyltransferase (EC 2.4.2.18) |
|
Anthranilate phosphoribosyltransferase (EC 2.4.2.18) |
| FTE_0284 |
Gene: FTE_0284: hypothetical protein |
|
Gene: FTT_1800c: hypothetical protein |
hypothetical protein |
| FTE_0283 |
Gene: FTE_0283: hypothetical protein |
Gene: Fphi_1599: hypothetical protein |
|
hypothetical protein |
| FTE_0282 |
Gene: FTE_0282: hypothetical protein |
Gene: Fphi_1600: hypothetical protein |
Gene: FTT_1798c: hypothetical protein |
hypothetical protein |
| msrA |
Gene: FTE_0281: Peptide methionine sulfoxide reductase (EC 1.8.4.11) |
Gene: Fphi_0836: Peptide methionine sulfoxide reductase (EC 1.8.4.11) |
Gene: FTT_1797c: Peptide methionine sulfoxide reductase (EC 1.8.4.11) |
Peptide methionine sulfoxide reductase (EC 1.8.4.11) |
| FTE_0280 |
Gene: FTE_0280: hypothetical protein |
Gene: Fphi_0835: hypothetical protein |
Gene: FTT_1796c: hypothetical protein |
hypothetical protein |
| trpC |
Gene: FTE_0278: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) |
Gene: Fphi_0834: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) |
Gene: FTT_1795c: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) |
Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |