Regulog Nfa21130 - Nocardiaceae

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Metabolite transport
Effector:
Phylum:	Actinobacteria
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 4 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Nocardia farcinica IFM 10152	1	1
Rhodococcus erythropolis PR4	1	1
Rhodococcus opacus B4	1	1
Rhodococcus sp. RHA1	1	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes					Function

CRON 1.
pcaC	* Nocardia farcinica IFM 10152 Site: position = -69 score = 9.33644 sequence = GAAATGGCCCAT-(12)-GGAATGGACCAT Gene: nfa21120: 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein	* Rhodococcus erythropolis PR4 Site: position = -69 score = 9.0909 sequence = AGATTGGCCCAT-(12)-GGATTGAACCAT Gene: RER_05320: 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein	* Rhodococcus opacus B4 Site: position = -69 score = 9.23 sequence = GAATTGGCCCAA-(12)-GAATTGAACCAC Gene: ROP_51340: 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein	* Rhodococcus sp. RHA1 Site: position = -27 score = 9.51894 sequence = GAATTGGCCCAA-(12)-GAATTGAACCAT Gene: RHA1_ro05073: 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein	4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --