Regulog PdxQ2 - Rhodospirillales
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | Metabolite transport; Pyridoxine/pyridoxal homeostasis |
| Effector: | |
| Phylum: | Proteobacteria/Alpha |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhodospirillales
- By TF family - GntR/MocR
- By pathway - Metabolite transport
- By pathway - Pyridoxine/pyridoxal homeostasis
| Genome | Genes | Operons |
|---|---|---|
| Gluconacetobacter diazotrophicus PAl 5 | 4 | 3 |
| Gluconobacter oxydans 621H | ||
| Granulibacter bethesdensis CGDNIH1 | ||
| Azospirillum sp. B510 | ||
| Acetobacter pasteurianus IFO 3283-01 | ||
| Magnetospirillum magneticum AMB-1 | ||
| Magnetospirillum magnetotacticum MS-1 | ||
| Rhodospirillum centenum SW | ||
| Rhodospirillum rubrum ATCC 11170 | 4 | 4 |
| Genes | Function | |||||||||
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| CRON 1. | ||||||||||
| pdxQ2 |
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Gluconacetobacter diazotrophicus PAl 5 Site: position = -112 score = 5.73562 sequence = TCAATTGTATT-(0)-AGTACAATTTC Site: position = -37 score = 6.68541 sequence = TATATTGTCAT-(0)-AGTTCAATCAA Gene: Gdia_0682: Transcriptional regulator, GntR/MocR family |
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Rhodospirillum rubrum ATCC 11170 Site: position = -43 score = 7.55345 sequence = TAGATTGTCAC-(1)-GTAACAATTTA Gene: Rru_A3041: Transcriptional regulator, GntR/MocR family |
Transcriptional regulator, GntR/MocR family |
| CRON 2. | ||||||||||
| PF01810 |
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Rhodospirillum rubrum ATCC 11170 Site: position = -35 score = 7.66509 sequence = CAAAGTGTCCT-(0)-ATGACAGGTTG Gene: Rru_A3759: Transporter, LysE family |
Transporter, LysE family |
| CRON 3. | ||||||||||
| Gdia_1401 |
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Gluconacetobacter diazotrophicus PAl 5 Site: position = -89 score = 9.21821 sequence = AAAAGTGTCAC-(0)-GTGACACTATA Gene: Gdia_1401: Antibiotic biosynthesis monooxygenase |
Gene: GOX1098: Antibiotic biosynthesis monooxygenase |
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Gene: APA01_22970: Antibiotic biosynthesis monooxygenase |
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Antibiotic biosynthesis monooxygenase |
| CRON 4. | ||||||||||
| pdxQ2 |
Gene: Gdia_1400: Transcriptional regulator, GntR/MocR family |
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Rhodospirillum rubrum ATCC 11170 Site: position = -191 score = 7.66509 sequence = CAACCTGTCAT-(0)-AGGACACTTTG Gene: Rru_A3760: Transcriptional regulator, GntR/MocR family |
Transcriptional regulator, GntR/MocR family |
| CRON 5. | ||||||||||
| Gdia_0681 |
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Gluconacetobacter diazotrophicus PAl 5 Site: position = -57 score = 5.73562 sequence = GAAATTGTACT-(0)-AATACAATTGA Site: position = -132 score = 6.68541 sequence = TTGATTGAACT-(0)-ATGACAATATA Gene: Gdia_0681: hypothetical protein |
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hypothetical protein |
| phzF |
Gene: Gdia_0680: Phenazine biosynthesis protein PhzF |
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Gene: Magn03003362: Phenazine biosynthesis protein PhzF |
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Phenazine biosynthesis protein PhzF |
| CRON 6. | ||||||||||
| Rru_A3040 |
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Rhodospirillum rubrum ATCC 11170 Site: position = -105 score = 7.55345 sequence = TAAATTGTTAC-(1)-GTGACAATCTA Gene: Rru_A3040: Cysteine desulfurase (EC 2.8.1.7) |
Cysteine desulfurase (EC 2.8.1.7) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |