Regulog VSAK1_09283 - Vibrionales
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | Metabolite transport |
| Effector: | |
| Phylum: | Proteobacteria/Gamma |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Vibrionales
- By TF family - GntR/MocR
- By pathway - Metabolite transport
| Genome | Genes | Operons |
|---|---|---|
| Photobacterium profundum SS9 | 2 | 2 |
| Vibrio angustum S14 | 2 | 2 |
| Vibrio cholerae O1 biovar eltor str. N16961 | ||
| Vibrio fischeri ES114 | ||
| Vibrio harveyi ATCC BAA-1116 | ||
| Vibrio parahaemolyticus RIMD 2210633 | ||
| Vibrio salmonicida LFI1238 | ||
| Vibrio shilonii AK1 | 2 | 2 |
| Vibrio splendidus LGP32 | ||
| Vibrio vulnificus CMCP6 |
| Genes | Function | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||
| VSAK1_09283 |
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Photobacterium profundum SS9 Site: position = -104 score = 8.08856 sequence = AATTGTATC-(0)-GACACAATT Site: position = -10 score = 7.74356 sequence = TATTGTCAC-(1)-ATGACAATC Gene: PBPRA0298: Transcriptional regulator, GntR family |
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Vibrio angustum S14 Site: position = -125 score = 8.53138 sequence = AATTGTACC-(0)-GATACAATT Site: position = -10 score = 7.74356 sequence = TATTGTCAC-(1)-ATGACAATC Gene: VAS14_21252: Transcriptional regulator, GntR family |
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Vibrio shilonii AK1 Site: position = -105 score = 8.53138 sequence = AATTGTACC-(0)-GATACAATT Site: position = -10 score = 7.74356 sequence = TATTGTCAC-(1)-ATGACAATC Gene: VSAK1_09283: Transcriptional regulator, GntR family |
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Transcriptional regulator, GntR family |
| CRON 2. | |||||||||||
| PF01810 |
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Photobacterium profundum SS9 Site: position = -58 score = 8.08856 sequence = AATTGTGTC-(0)-GATACAATT Site: position = -153 score = 7.74356 sequence = GATTGTCAT-(1)-GTGACAATA Gene: PBPRA0299: Transporter, LysE family |
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Vibrio angustum S14 Site: position = -71 score = 8.53138 sequence = AATTGTATC-(0)-GGTACAATT Site: position = -187 score = 7.74356 sequence = GATTGTCAT-(1)-GTGACAATA Gene: VAS14_21247: Transporter, LysE family |
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Vibrio shilonii AK1 Site: position = -128 score = 7.74356 sequence = GATTGTCAT-(1)-GTGACAATA Site: position = -32 score = 8.53138 sequence = AATTGTATC-(0)-GGTACAATT Gene: VSAK1_09278: Transporter, LysE family |
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Transporter, LysE family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |