Regulog PdxQ - Streptomycetaceae
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | Pyridoxine/pyridoxal homeostasis; Metabolite transport |
| Effector: | Pyridoxal-5-phosphate |
| Phylum: | Actinobacteria |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Streptomycetaceae
- By TF family - GntR/MocR
- By effector - Pyridoxal-5-phosphate
- By pathway - Pyridoxine/pyridoxal homeostasis
- By pathway - Metabolite transport
| Genome | Genes | Operons |
|---|---|---|
| Streptomyces avermitilis MA-4680 | 2 | 2 |
| Streptomyces coelicolor A3(2) | 2 | 2 |
| Streptomyces griseus subsp. griseus NBRC 13350 | 2 | 2 |
| Streptomyces scabiei 87.22 | 2 | 2 |
| Genes | Function | ||||
|---|---|---|---|---|---|
| CRON 1. | |||||
| pdxQ |
*
Streptomyces avermitilis MA-4680 Site: position = -142 score = 8.01169 sequence = AGCGCTATCCT-(15)-AGCGTAGCAGC Gene: SAV_6752: Transcriptional regulator, GntR/MocR family |
*
Streptomyces coelicolor A3(2) Site: position = -55 score = 7.90217 sequence = AGCGCTACTCT-(15)-AGCGTAGCAGC Gene: SCO1587: Transcriptional regulator, GntR/MocR family |
*
Streptomyces griseus subsp. griseus NBRC 13350 Site: position = -19 score = 8.05379 sequence = AGCGCTATTGT-(15)-AGCGTAGCAGC Gene: SGR_5946: Transcriptional regulator, GntR/MocR family |
*
Streptomyces scabiei 87.22 Site: position = -19 score = 8.33384 sequence = AGCGCTACTCT-(15)-AGCGTAGCAGT Gene: SCAB_74111: Transcriptional regulator, GntR/MocR family |
Transcriptional regulator, GntR/MocR family |
| CRON 2. | |||||
| PF00892 |
*
Streptomyces avermitilis MA-4680 Site: position = -16 score = 8.01169 sequence = GCTGCTACGCT-(15)-AGGATAGCGCT Gene: SAV_6751: Permease of the drug/metabolite transporter (DMT) superfamily |
*
Streptomyces coelicolor A3(2) Site: position = -16 score = 7.90217 sequence = GCTGCTACGCT-(15)-AGAGTAGCGCT Gene: SCO1588: Permease of the drug/metabolite transporter (DMT) superfamily |
*
Streptomyces griseus subsp. griseus NBRC 13350 Site: position = -16 score = 8.05379 sequence = GCTGCTACGCT-(15)-ACAATAGCGCT Gene: SGR_5945: Permease of the drug/metabolite transporter (DMT) superfamily |
*
Streptomyces scabiei 87.22 Site: position = -85 score = 8.33384 sequence = ACTGCTACGCT-(15)-AGAGTAGCGCT Gene: SCAB_74101: Permease of the drug/metabolite transporter (DMT) superfamily |
Permease of the drug/metabolite transporter (DMT) superfamily |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |