Regulog PdxQ - Nocardiaceae

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Pyridoxine/pyridoxal homeostasis; Metabolite transport
Effector:	Pyridoxal-5-phosphate
Phylum:	Actinobacteria
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 3 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Nocardia farcinica IFM 10152
Rhodococcus erythropolis PR4	3	3
Rhodococcus opacus B4
Rhodococcus sp. RHA1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes					Function

CRON 1.
pdxQ	Nocardia farcinica IFM 10152	* Rhodococcus erythropolis PR4 Site: position = -19 score = 9.07954 sequence = AGCGCTACTAT-(15)-ATGATAGCAGT Gene: RER_10490: Transcriptional regulator, GntR/MocR family	Rhodococcus opacus B4	Rhodococcus sp. RHA1	Transcriptional regulator, GntR/MocR family

CRON 2.
PF00155	Nocardia farcinica IFM 10152	* Rhodococcus erythropolis PR4 Site: position = -156 score = 9.07954 sequence = ACTGCTATCAT-(15)-ATAGTAGCGCT Gene: RER_10480: Pyridoxal phosphate-dependent transferase	Rhodococcus opacus B4	Rhodococcus sp. RHA1	Pyridoxal phosphate-dependent transferase

CRON 3.
PF00892	Nocardia farcinica IFM 10152	* Rhodococcus erythropolis PR4 Site: position = -64 score = 9.099 sequence = ACTGCTATCGT-(15)-AGAGTAGCGCT Gene: RER_26220: Permease of the drug/metabolite transporter (DMT) superfamily	Rhodococcus opacus B4	Rhodococcus sp. RHA1	Permease of the drug/metabolite transporter (DMT) superfamily

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --