Regulog VSAL_I1306 - Vibrionales
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | |
| Effector: | |
| Phylum: | Proteobacteria/Gamma |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Vibrionales
- By TF family - GntR/MocR
| Genome | Genes | Operons |
|---|---|---|
| Vibrio angustum S14 | 2 | 2 |
| Vibrio cholerae O1 biovar eltor str. N16961 | ||
| Vibrio fischeri ES114 | ||
| Vibrio harveyi ATCC BAA-1116 | ||
| Vibrio parahaemolyticus RIMD 2210633 | ||
| Vibrio salmonicida LFI1238 | 4 | 2 |
| Vibrio shilonii AK1 | ||
| Vibrio splendidus LGP32 | ||
| Vibrio vulnificus CMCP6 | ||
| Photobacterium profundum SS9 |
| Genes | Function | ||||||||||
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| CRON 1. | |||||||||||
| VSAL_I1305 |
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Vibrio salmonicida LFI1238 Site: position = -71 score = 5.36833 sequence = ATTGACATATGTCACT Gene: VSAL_I1305: hypothetical protein |
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hypothetical protein |
| COG2084 |
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Vibrio angustum S14 Site: position = -43 score = 5.10587 sequence = AATGACATAACTCAAT Site: position = -221 score = 5.96888 sequence = ATTGACATATGTCAAT Gene: VAS14_03183: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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Gene: VSAL_I1304: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
| COG0730 |
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Gene: VSAL_I1303: membrane protein |
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membrane protein |
| CRON 2. | |||||||||||
| VSAL_I1306 |
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Vibrio angustum S14 Site: position = -279 score = 5.10587 sequence = ATTGAGTTATGTCATT Site: position = -101 score = 5.96888 sequence = ATTGACATATGTCAAT Gene: VAS14_03178: Transcriptional regulator, GntR family |
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Vibrio salmonicida LFI1238 Site: position = -105 score = 5.36833 sequence = AGTGACATATGTCAAT Gene: VSAL_I1306: Transcriptional regulator, GntR family |
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Transcriptional regulator, GntR family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |