Regulog NrtR - Clostridia-1
| Regulator type: | Transcription factor |
| Regulator family: | NrtR |
| Regulation mode: | repressor |
| Biological process: | NAD biosynthesis |
| Effector: | Adenosine diphosphate ribose |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - NrtR
- By taxonomy - Clostridia-1
- By TF family - NrtR
- By effector - Adenosine diphosphate ribose
- By pathway - NAD biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Clostridium acetobutylicum ATCC 824 | 6 | 2 |
| Clostridium beijerincki NCIMB 8052 | 2 | 1 |
| Clostridium botulinum A str. ATCC 3502 | ||
| Clostridium butyricum 5521 | ||
| Clostridium kluyveri DSM 555 | ||
| Clostridium novyi NT | ||
| Clostridium perfringens ATCC 13124 | ||
| Clostridium tetani E88 |
| Genes | Function | ||||||||
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| CRON 1. | |||||||||
| nrtR |
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Clostridium acetobutylicum ATCC 824 Site: position = -75 score = 6.31036 sequence = TTTGTATCAAAATGATGCTAA Site: position = -53 score = 5.55685 sequence = ATAGTTTTAATATGATACAAA Gene: CAC1777: Nudix-related transcriptional regulator NrtR |
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Clostridium beijerincki NCIMB 8052 Site: position = -69 score = 5.64995 sequence = ATAGAATCAAATTGATATTAT Gene: Cbei_2075: Nudix-related transcriptional regulator NrtR |
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Nudix-related transcriptional regulator NrtR |
| prs |
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Gene: Cbei_2076: Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) |
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Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) |
| pncA |
Gene: CAC1778: Nicotinamidase (EC 3.5.1.19) |
Gene: Cbei_2077: Nicotinamidase (EC 3.5.1.19) |
Gene: CBO1134: Nicotinamidase (EC 3.5.1.19) |
Gene: CBY_1219: Nicotinamidase (EC 3.5.1.19) |
Gene: CKL_2731: Nicotinamidase (EC 3.5.1.19) |
Gene: NT01CX_2341: Nicotinamidase (EC 3.5.1.19) |
Gene: CPF_0569: Nicotinamidase (EC 3.5.1.19) |
Gene: CTC00699: Nicotinamidase (EC 3.5.1.19) |
Nicotinamidase (EC 3.5.1.19) |
| CRON 2. | |||||||||
| CAC1779 |
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Clostridium acetobutylicum ATCC 824 Site: position = -169 score = 4.93426 sequence = TTAGCTTTATTTTTATACAAA Site: position = -102 score = 6.49231 sequence = TTTGTATCATATTGGTACAAA Site: position = -39 score = 6.18943 sequence = TTTGTATCAATATAGTACAAA Gene: CAC1779: hypothetical protein |
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hypothetical protein |
| pncB |
Gene: CAC1780: Nicotinate phosphoribosyltransferase (EC 2.4.2.11) |
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Nicotinate phosphoribosyltransferase (EC 2.4.2.11) |
| nadD |
Gene: CAC1781: Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) |
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Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) |
| nadE |
Gene: CAC1782: NAD synthetase (EC 6.3.1.5) |
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NAD synthetase (EC 6.3.1.5) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |