Regulog PdxR2 - Ralstonia

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Pyridoxine/pyridoxal homeostasis
Effector:	Pyridoxal-5-phosphate
Phylum:	Proteobacteria/Beta
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 2 sites [see more]

Member of regulog collections

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes							Function

CRON 1.
COG0325	Cupriavidus taiwanensis	Ralstonia eutropha H16	Ralstonia eutropha JMP134	* Ralstonia metallidurans CH34 Site: position = -79 score = 5.81406 sequence = TTTGTCCTATGACAAT Gene: Rmet_4113: Predicted pyridoxal phosphate-dependent enzyme, YBL036C type	Ralstonia pickettii 12J	Ralstonia solanacearum GMI1000	Predicted pyridoxal phosphate-dependent enzyme, YBL036C type
pdxK	Cupriavidus taiwanensis	Ralstonia eutropha H16	Ralstonia eutropha JMP134	Ralstonia metallidurans CH34 Gene: Rmet_4114: Pyridoxal kinase (EC 2.7.1.35)	Ralstonia pickettii 12J	Ralstonia solanacearum GMI1000	Pyridoxal kinase (EC 2.7.1.35)
pdxZ	Cupriavidus taiwanensis	Ralstonia eutropha H16	Ralstonia eutropha JMP134	Ralstonia metallidurans CH34 Gene: Rmet_4115: Short hypothetical protein in pyridoxine metabolism	Ralstonia pickettii 12J	Ralstonia solanacearum GMI1000	Short hypothetical protein in pyridoxine metabolism

CRON 2.
pdxR2	Cupriavidus taiwanensis	Ralstonia eutropha H16	Ralstonia eutropha JMP134	* Ralstonia metallidurans CH34 Site: position = -139 score = 5.01393 sequence = TTTGCCCTATGCCAAT Gene: Rmet_4117: Predicted transcriptional regulator of pyridoxine metabolism, GntR/MocR family	Ralstonia pickettii 12J	Ralstonia solanacearum GMI1000	Predicted transcriptional regulator of pyridoxine metabolism, GntR/MocR family

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --