Regulog CBO1205 - Clostridia-1

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Multidrug efflux; Macrolides efflux
Effector:
Phylum:	Firmicutes
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 3 sites [see more]

Member of regulog collections

By taxonomy - Clostridia-1
By TF family - GntR/Others
By pathway - Multidrug efflux
By pathway - Macrolides efflux

Statistics of regulated genes
Genome	Genes	Operons
Clostridium acetobutylicum ATCC 824
Clostridium beijerincki NCIMB 8052
Clostridium botulinum A str. ATCC 3502	3	1
Clostridium butyricum 5521
Clostridium kluyveri DSM 555
Clostridium novyi NT
Clostridium perfringens ATCC 13124
Clostridium tetani E88	6	2

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes									Function

CRON 1.
CTC01688	Clostridium acetobutylicum ATCC 824	Clostridium beijerincki NCIMB 8052	Clostridium botulinum A str. ATCC 3502	Clostridium butyricum 5521	Clostridium kluyveri DSM 555	Clostridium novyi NT	Clostridium perfringens ATCC 13124	* Clostridium tetani E88 Site: position = -39 score = 5.96904 sequence = TATACTTAGTTATATTAGTAACTAACCAAT Gene: CTC01688: hypothetical protein	hypothetical protein
CBO1205	Clostridium acetobutylicum ATCC 824	Clostridium beijerincki NCIMB 8052	* Clostridium botulinum A str. ATCC 3502 Site: position = -50 score = 6.55364 sequence = TATAGTTAGTCATATAAGTAATTAACCAAC Gene: CBO1205: Transcriptional regulator, GntR family	Clostridium butyricum 5521	Clostridium kluyveri DSM 555	Clostridium novyi NT	Clostridium perfringens ATCC 13124	Clostridium tetani E88 Gene: CTC01687: Transcriptional regulator, GntR family	Transcriptional regulator, GntR family
CTC01686	Clostridium acetobutylicum ATCC 824	Clostridium beijerincki NCIMB 8052	Clostridium botulinum A str. ATCC 3502	Clostridium butyricum 5521	Clostridium kluyveri DSM 555	Clostridium novyi NT	Clostridium perfringens ATCC 13124	Clostridium tetani E88 Gene: CTC01686: hypothetical protein	hypothetical protein
lp_2743	Clostridium acetobutylicum ATCC 824	Clostridium beijerincki NCIMB 8052	Clostridium botulinum A str. ATCC 3502 Gene: CBO1206: ABC-type multidrug transport system, ATPase component	Clostridium butyricum 5521	Clostridium kluyveri DSM 555	Clostridium novyi NT	Clostridium perfringens ATCC 13124	Clostridium tetani E88 Gene: CTC01685: ABC-type multidrug transport system, ATPase component	ABC-type multidrug transport system, ATPase component
CTC01684	Clostridium acetobutylicum ATCC 824	Clostridium beijerincki NCIMB 8052	Clostridium botulinum A str. ATCC 3502	Clostridium butyricum 5521	Clostridium kluyveri DSM 555	Clostridium novyi NT	Clostridium perfringens ATCC 13124	Clostridium tetani E88 Gene: CTC01684: hypothetical protein	hypothetical protein
lp_2744	Clostridium acetobutylicum ATCC 824	Clostridium beijerincki NCIMB 8052	Clostridium botulinum A str. ATCC 3502 Gene: CBO1207: ABC-type multidrug transport system, permease component	Clostridium butyricum 5521	Clostridium kluyveri DSM 555	Clostridium novyi NT	Clostridium perfringens ATCC 13124	* Clostridium tetani E88 Site: position = -94 score = 6.65061 sequence = TATAGTTAGTTATACATGTAACTAACCAAC Gene: CTC01397: ABC-type multidrug transport system, permease component	ABC-type multidrug transport system, permease component

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog CBO1205 - Clostridia-1

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --