Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog Mce2R - Frankineae/Propionibacterineae/Pseudonocardiaceae

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: Fatty acid metabolism
Effector:
Phylum: Actinobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 1 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Actinosynnema mirum DSM 43827
Saccharomonospora viridis DSM 43017
Saccharopolyspora erythraea NRRL 2338
Acidothermus cellulolyticus 11B
Frankia sp. CcI3
Frankia sp. EAN1pec
Nakamurella multipartita DSM 44233
Nocardioides sp. JS614 2 1
Propionibacterium acnes KPA171202
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
mce2R
 
Actinosynnema mirum DSM 43827
 
Saccharomonospora viridis DSM 43017
 
Saccharopolyspora erythraea NRRL 2338
 
Acidothermus cellulolyticus 11B
 
Frankia sp. CcI3
 
Frankia sp. EAN1pec
 
Nakamurella multipartita DSM 44233
*
Nocardioides sp. JS614

Site:
position = -36
score = 5.5017
sequence = CAATCTGGTCTGACCACTTGA

Gene: Noca_0011: Transcriptional regulator, GntR family
 
Propionibacterium acnes KPA171202
Transcriptional regulator, GntR family
fah
 
Actinosynnema mirum DSM 43827
 
Saccharomonospora viridis DSM 43017
 
Saccharopolyspora erythraea NRRL 2338
 
Acidothermus cellulolyticus 11B
 
Frankia sp. CcI3

Gene: Francci3_3875: Fatty acid hydroxylase FAH1P
 
Frankia sp. EAN1pec

Gene: Franean1_0850: Fatty acid hydroxylase FAH1P
 
Nakamurella multipartita DSM 44233
 
Nocardioides sp. JS614

Gene: Noca_0010: Fatty acid hydroxylase FAH1P
 
Propionibacterium acnes KPA171202
Fatty acid hydroxylase FAH1P
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD