Regulog SCO1410 - Streptomycetaceae
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | |
| Effector: | |
| Phylum: | Actinobacteria |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Streptomycetaceae
- By TF family - GntR/Others
| Genome | Genes | Operons |
|---|---|---|
| Streptomyces avermitilis MA-4680 | 4 | 2 |
| Streptomyces coelicolor A3(2) | 10 | 4 |
| Streptomyces griseus subsp. griseus NBRC 13350 | ||
| Streptomyces scabiei 87.22 | 6 | 2 |
| Genes | Function | ||||
|---|---|---|---|---|---|
| CRON 1. | |||||
| SCF51A.18c |
|
*
Streptomyces coelicolor A3(2) Site: position = -131 score = 5.73459 sequence = GATCGTTCAACGATC Site: position = -251 score = 5.73459 sequence = GATCGTTGAACGATC Gene: SCO0440: FIG015373: Membrane protein |
|
|
FIG015373: Membrane protein |
| SCF51A.17c |
|
Gene: SCO0439: FIG001614: Membrane protein |
|
|
FIG001614: Membrane protein |
| pcp |
|
Gene: SCO0438: Pyrrolidone-carboxylate peptidase (EC 3.4.19.3) |
|
|
Pyrrolidone-carboxylate peptidase (EC 3.4.19.3) |
| SCF51A.15c |
|
Gene: SCO0437: conserved hypothetical protein SCF51A.15c |
|
|
conserved hypothetical protein SCF51A.15c |
| CRON 2. | |||||
| SCO1410 |
*
Streptomyces avermitilis MA-4680 Site: position = -65 score = 5.73459 sequence = GATCGTTGAACGATC Gene: SAV_6942: Transcriptional regulator, GntR family |
*
Streptomyces coelicolor A3(2) Site: position = -65 score = 5.73459 sequence = GATCGTTCAACGATC Gene: SCO1410: Transcriptional regulator, GntR family |
|
*
Streptomyces scabiei 87.22 Site: position = -64 score = 5.73459 sequence = GATCGTTGAACGATC Gene: SCAB_76011: Transcriptional regulator, GntR family |
Transcriptional regulator, GntR family |
| CRON 3. | |||||
| COG2814 |
*
Streptomyces avermitilis MA-4680 Site: position = -205 score = 5.73459 sequence = GATCGTTCAACGATC Gene: SAV_6941: Major facilitator superfamily transporter |
*
Streptomyces coelicolor A3(2) Site: position = -87 score = 5.73459 sequence = GATCGTTGAACGATC Gene: SCO1411: Major facilitator superfamily transporter |
|
*
Streptomyces scabiei 87.22 Site: position = -126 score = 5.73459 sequence = GATCGTTCAACGATC Gene: SCAB_76001: Major facilitator superfamily transporter |
Major facilitator superfamily transporter |
| COG4336 |
Gene: SAV_6940: hypothetical protein possibly connected to lactam utilization and allophanate hydrolase |
Gene: SCO1412: hypothetical protein possibly connected to lactam utilization and allophanate hydrolase |
|
Gene: SCAB_75991: hypothetical protein possibly connected to lactam utilization and allophanate hydrolase |
hypothetical protein possibly connected to lactam utilization and allophanate hydrolase |
| COG1540 |
Gene: SAV_6939: Uncharacterized proteins, homologs of lactam utilization protein B |
*
Streptomyces coelicolor A3(2) Site: position = -150 score = 5.73459 sequence = GATCGTTGAACGATC Site: position = -30 score = 5.73459 sequence = GATCGTTCAACGATC Gene: SCO0441: Uncharacterized proteins, homologs of lactam utilization protein B |
Gene: SGR_3193: Uncharacterized proteins, homologs of lactam utilization protein B |
Gene: SCAB_75981: Uncharacterized proteins, homologs of lactam utilization protein B |
Uncharacterized proteins, homologs of lactam utilization protein B |
| alhA |
Gene: SAV_6938: Putative allophanate hydrolase 2, subunit 1 (EC 3.5.1.54) |
Gene: SCO0442: Putative allophanate hydrolase 2, subunit 1 (EC 3.5.1.54) |
Gene: SGR_3192: Putative allophanate hydrolase 2, subunit 1 (EC 3.5.1.54) |
Gene: SCAB_75971: Putative allophanate hydrolase 2, subunit 1 (EC 3.5.1.54) |
Putative allophanate hydrolase 2, subunit 1 (EC 3.5.1.54) |
| alhB |
Gene: SAV_6937: Putative allophanate hydrolase 2, subunit 2 (EC 3.5.1.54) |
Gene: SCO0443: Putative allophanate hydrolase 2, subunit 2 (EC 3.5.1.54) |
Gene: SGR_3191: Putative allophanate hydrolase 2, subunit 2 (EC 3.5.1.54) |
Gene: SCAB_75961: Putative allophanate hydrolase 2, subunit 2 (EC 3.5.1.54) |
Putative allophanate hydrolase 2, subunit 2 (EC 3.5.1.54) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |