Regulog PhnF - Streptomycetaceae
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Phosphonate utilization; 2-aminoethylphosphonate utilization |
| Effector: | |
| Phylum: | Actinobacteria |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Streptomycetaceae
- By TF family - GntR/Others
- By pathway - Phosphonate utilization
- By pathway - 2-aminoethylphosphonate utilization
| Genome | Genes | Operons |
|---|---|---|
| Streptomyces avermitilis MA-4680 | ||
| Streptomyces coelicolor A3(2) | ||
| Streptomyces griseus subsp. griseus NBRC 13350 | 6 | 1 |
| Streptomyces scabiei 87.22 |
| Genes | Function | ||||
|---|---|---|---|---|---|
| CRON 1. | |||||
| COG0665 |
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*
Streptomyces griseus subsp. griseus NBRC 13350 Site: position = -80 score = 3.76814 sequence = ACGGGTCTGGTCCAAA Gene: SGR_4692: Putative FAD dependent oxidoreductase |
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Putative FAD dependent oxidoreductase |
| phnX |
|
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Gene: SGR_4693: Phosphonoacetaldehyde hydrolase (EC 3.11.1.1) |
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Phosphonoacetaldehyde hydrolase (EC 3.11.1.1) |
| phnT |
|
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Gene: SGR_4694: Probable 2-aminoethylphosphonate ABC transporter, ATP-binding protein |
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Probable 2-aminoethylphosphonate ABC transporter, ATP-binding protein |
| phnU |
|
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Gene: SGR_4695: Probable 2-aminoethylphosphonate ABC transporter, permease protein 1 |
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Probable 2-aminoethylphosphonate ABC transporter, permease protein 1 |
| phnV |
|
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Gene: SGR_4696: 2-aminoethylphosphonate ABC transporter permease protein II (TC 3.A.1.9.1) |
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Probable 2-aminoethylphosphonate ABC transporter, permease protein 2 |
| phnT |
|
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Gene: SGR_4697: Probable 2-aminoethylphosphonate ABC transporter, permease protein 2 |
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Probable 2-aminoethylphosphonate ABC transporter, permease protein 2 |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |