Regulog PhnF - Streptomycetaceae

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Phosphonate utilization; 2-aminoethylphosphonate utilization
Effector:
Phylum:	Actinobacteria
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

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Member of regulog collections

By taxonomy - Streptomycetaceae
By TF family - GntR/Others
By pathway - Phosphonate utilization
By pathway - 2-aminoethylphosphonate utilization

Statistics of regulated genes
Genome	Genes	Operons
Streptomyces avermitilis MA-4680
Streptomyces coelicolor A3(2)
Streptomyces griseus subsp. griseus NBRC 13350	6	1
Streptomyces scabiei 87.22

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes					Function

CRON 1.
COG0665	Streptomyces avermitilis MA-4680	Streptomyces coelicolor A3(2)	* Streptomyces griseus subsp. griseus NBRC 13350 Site: position = -80 score = 3.76814 sequence = ACGGGTCTGGTCCAAA Gene: SGR_4692: Putative FAD dependent oxidoreductase	Streptomyces scabiei 87.22	Putative FAD dependent oxidoreductase
phnX	Streptomyces avermitilis MA-4680	Streptomyces coelicolor A3(2)	Streptomyces griseus subsp. griseus NBRC 13350 Gene: SGR_4693: Phosphonoacetaldehyde hydrolase (EC 3.11.1.1)	Streptomyces scabiei 87.22	Phosphonoacetaldehyde hydrolase (EC 3.11.1.1)
phnT	Streptomyces avermitilis MA-4680	Streptomyces coelicolor A3(2)	Streptomyces griseus subsp. griseus NBRC 13350 Gene: SGR_4694: Probable 2-aminoethylphosphonate ABC transporter, ATP-binding protein	Streptomyces scabiei 87.22	Probable 2-aminoethylphosphonate ABC transporter, ATP-binding protein
phnU	Streptomyces avermitilis MA-4680	Streptomyces coelicolor A3(2)	Streptomyces griseus subsp. griseus NBRC 13350 Gene: SGR_4695: Probable 2-aminoethylphosphonate ABC transporter, permease protein 1	Streptomyces scabiei 87.22	Probable 2-aminoethylphosphonate ABC transporter, permease protein 1
phnV	Streptomyces avermitilis MA-4680	Streptomyces coelicolor A3(2)	Streptomyces griseus subsp. griseus NBRC 13350 Gene: SGR_4696: 2-aminoethylphosphonate ABC transporter permease protein II (TC 3.A.1.9.1)	Streptomyces scabiei 87.22	Probable 2-aminoethylphosphonate ABC transporter, permease protein 2
phnT	Streptomyces avermitilis MA-4680	Streptomyces coelicolor A3(2)	Streptomyces griseus subsp. griseus NBRC 13350 Gene: SGR_4697: Probable 2-aminoethylphosphonate ABC transporter, permease protein 2	Streptomyces scabiei 87.22	Probable 2-aminoethylphosphonate ABC transporter, permease protein 2

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog PhnF - Streptomycetaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --