Regulog IolR - Oceanospirillales/Alteromonadales

Properties
Regulator type:	Transcription factor
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	Inositol utilization
Effector:
Phylum:	Proteobacteria/gamma
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 1 sites [see more]

Member of regulog collections

By taxonomy - Oceanospirillales/Alteromonadales
By TF family - LacI
By pathway - Inositol utilization

Statistics of regulated genes
Genome	Genes	Operons
Cellvibrio japonicus Ueda107
Marinobacter aqueolei
Marinobacter sp. ELB17
Saccharophagus degradans 2-40
Teredinibacter turnerae T7901
Alcanivorax borkumensis SK2
Chromohalobacter salexigens DSM 3043
Hahella chejuensis KCTC 2396	7	1
Marinomonas sp. MWYL1
Oceanobacter sp. RED65
Oceanospirillum sp. MED92
Reinekea sp. MED297

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes													Function

CRON 1.
iolV	Cellvibrio japonicus Ueda107	Marinobacter aqueolei	Marinobacter sp. ELB17	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Alcanivorax borkumensis SK2	Chromohalobacter salexigens DSM 3043	* Hahella chejuensis KCTC 2396 Site: position = -76 score = 6.12174 sequence = TTTTGCACACGGGTGCAATG Gene: HCH_03296: Predicted inositol ABC transporter, substrate-binding protein	Marinomonas sp. MWYL1	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Reinekea sp. MED297	Predicted inositol ABC transporter, substrate-binding protein
iolW	Cellvibrio japonicus Ueda107	Marinobacter aqueolei	Marinobacter sp. ELB17	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Alcanivorax borkumensis SK2	Chromohalobacter salexigens DSM 3043	Hahella chejuensis KCTC 2396 Gene: HCH_03297: Predicted inositol ABC transporter, permease protein 1	Marinomonas sp. MWYL1	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Reinekea sp. MED297	Predicted inositol ABC transporter, permease protein 1
iolX	Cellvibrio japonicus Ueda107	Marinobacter aqueolei	Marinobacter sp. ELB17	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Alcanivorax borkumensis SK2	Chromohalobacter salexigens DSM 3043	Hahella chejuensis KCTC 2396 Gene: HCH_03298: Predicted inositol ABC transporter, permease protein 2	Marinomonas sp. MWYL1	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Reinekea sp. MED297	Predicted inositol ABC transporter, permease protein 2
iolY	Cellvibrio japonicus Ueda107	Marinobacter aqueolei	Marinobacter sp. ELB17	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Alcanivorax borkumensis SK2	Chromohalobacter salexigens DSM 3043	Hahella chejuensis KCTC 2396 Gene: HCH_03299: Predicted inositol ABC transporter, ATP-binding protein	Marinomonas sp. MWYL1 Gene: Mmwyl1_2713: Predicted inositol ABC transporter, ATP-binding protein	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Reinekea sp. MED297	Predicted inositol ABC transporter, ATP-binding protein
iolZ	Cellvibrio japonicus Ueda107	Marinobacter aqueolei	Marinobacter sp. ELB17	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Alcanivorax borkumensis SK2	Chromohalobacter salexigens DSM 3043	Hahella chejuensis KCTC 2396 Gene: HCH_03300: Predicted metal-dependent hydrolase	Marinomonas sp. MWYL1 Gene: Mmwyl1_0184: Predicted metal-dependent hydrolase	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Reinekea sp. MED297	Predicted metal-dependent hydrolase
suhB	Cellvibrio japonicus Ueda107	Marinobacter aqueolei	Marinobacter sp. ELB17	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Alcanivorax borkumensis SK2	Chromohalobacter salexigens DSM 3043	Hahella chejuensis KCTC 2396 Gene: HCH_03301: Inositol-1-monophosphatase (EC 3.1.3.25)	Marinomonas sp. MWYL1	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Reinekea sp. MED297	Inositol-1-monophosphatase (EC 3.1.3.25)
iolR	Cellvibrio japonicus Ueda107	Marinobacter aqueolei	Marinobacter sp. ELB17	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Alcanivorax borkumensis SK2	Chromohalobacter salexigens DSM 3043	Hahella chejuensis KCTC 2396 Gene: HCH_03302: Inositol utilization transcriptional regulator IolR, LacI family	Marinomonas sp. MWYL1	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Reinekea sp. MED297	Inositol utilization transcriptional regulator IolR, LacI family

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog IolR - Oceanospirillales/Alteromonadales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --