Regulog LldR - Nocardiaceae
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Lactate utilization |
| Effector: | L-lactate |
| Phylum: | Actinobacteria |
| Visualization: | |
|
Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Nocardiaceae
- By TF family - GntR/Others
- By effector - L-lactate
- By pathway - Lactate utilization
| Genome | Genes | Operons |
|---|---|---|
| Nocardia farcinica IFM 10152 | ||
| Rhodococcus erythropolis PR4 | 4 | 2 |
| Rhodococcus opacus B4 | 4 | 2 |
| Rhodococcus sp. RHA1 | 2 | 2 |
| Genes | Function | ||||
|---|---|---|---|---|---|
| CRON 1. | |||||
| lldR |
|
*
Rhodococcus erythropolis PR4 Site: position = -76 score = 6.19742 sequence = TGTGGTCTGACCACA Gene: RER_52690: Lactate-responsive regulator LldR in Actinobacteria, GntR family |
*
Rhodococcus opacus B4 Site: position = -56 score = 6.19742 sequence = TGTGGTCTGACCACA Site: position = -32 score = 6.19742 sequence = TGTGGTCAGACCACA Gene: ROP_32710: Lactate-responsive regulator LldR in Actinobacteria, GntR family |
*
Rhodococcus sp. RHA1 Site: position = -56 score = 6.19742 sequence = TGTGGTCTGACCACA Site: position = -32 score = 6.19742 sequence = TGTGGTCAGACCACA Gene: RHA1_ro03478: Lactate-responsive regulator LldR in Actinobacteria, GntR family |
Lactate-responsive regulator LldR in Actinobacteria, GntR family |
| CRON 2. | |||||
| lldE |
|
*
Rhodococcus erythropolis PR4 Site: position = -37 score = 6.19742 sequence = TGTGGTCAGACCACA Gene: RER_52680: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE |
*
Rhodococcus opacus B4 Site: position = -62 score = 6.19742 sequence = TGTGGTCTGACCACA Site: position = -38 score = 6.19742 sequence = TGTGGTCAGACCACA Gene: ROP_32720: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE |
*
Rhodococcus sp. RHA1 Site: position = 25 score = 6.19742 sequence = TGTGGTCTGACCACA Site: position = 49 score = 6.19742 sequence = TGTGGTCAGACCACA Gene: RHA1_ro03479: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE |
L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE |
| lldF |
|
Gene: RER_52670: L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF |
Gene: ROP_32730: L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF |
Gene: RHA1_ro03480: L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF |
L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF |
| lldG |
Gene: nfa23580: L-lactate dehydrogenase, subunit LldG |
Gene: RER_52660: L-lactate dehydrogenase, subunit LldG |
Gene: ROP_32740: L-lactate dehydrogenase, subunit LldG |
Gene: RHA1_ro03481: L-lactate dehydrogenase, subunit LldG |
L-lactate dehydrogenase, subunit LldG |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |