Regulog NGR_b22600 - Rhizobiales

Properties
Regulator type:	Transcription factor
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	Sugar utilization
Effector:
Phylum:	Proteobacteria/Alpha
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 4 sites [see more]

Member of regulog collections

By taxonomy - Rhizobiales
By TF family - LacI
By pathway - Sugar utilization

Statistics of regulated genes
Genome	Genes	Operons
Agrobacterium tumefaciens str. C58 (Cereon)
Azorhizobium caulinodans ORS 571
Bartonella quintana str. Toulouse
Bradyrhizobium japonicum USDA 110
Bradyrhizobium sp. BTAi1
Brucella melitensis 16M
Mesorhizobium loti MAFF303099
Mesorhizobium sp. BNC1
Nitrobacter winogradskyi Nb-255
Rhizobium etli CFN 42
Rhizobium leguminosarum bv. viciae 3841
Rhizobium sp. NGR234	6	2
Rhodopseudomonas palustris CGA009
Sinorhizobium meliloti 1021
Xanthobacter autotrophicus Py2

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes																Function

CRON 1.
NGR_b22600	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	* Rhizobium sp. NGR234 Site: position = -114 score = 5.87547 sequence = GAATGTAAGCGCATACATAG Site: position = -48 score = 4.29264 sequence = GGATGTATGCGTATACATAT Gene: NGR_b22600: Transcriptional regulator, LacI family	Rhodopseudomonas palustris CGA009	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2	Transcriptional regulator, LacI family
COG3971	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234 Gene: NGR_b22610: 2-keto-4-pentenoate hydratase	Rhodopseudomonas palustris CGA009	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2	2-keto-4-pentenoate hydratase

CRON 2.
dctQ	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	* Rhizobium sp. NGR234 Site: position = -154 score = 4.29264 sequence = ATATGTATACGCATACATCC Site: position = -88 score = 5.87547 sequence = CTATGTATGCGCTTACATTC Gene: NGR_b22590: C4-dicarboxylate ABC transporter, small permease component	Rhodopseudomonas palustris CGA009	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2	C4-dicarboxylate ABC transporter, small permease component
dctM	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234 Gene: NGR_b22580: C4-dicarboxylate ABC transporter, large permease component	Rhodopseudomonas palustris CGA009	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2	C4-dicarboxylate ABC transporter, large permease component
dctP	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234 Gene: NGR_b22570: C4-dicarboxylate ABC transporter, periplasmic component	Rhodopseudomonas palustris CGA009	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2	C4-dicarboxylate ABC transporter, periplasmic component
garL	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234 Gene: NGR_b22560: putative aldolase	Rhodopseudomonas palustris CGA009	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2	putative aldolase

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog NGR_b22600 - Rhizobiales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --