Regulog BH1516 - Bacillales

Properties
Regulator type:	Transcription factor
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	Maltose utilization
Effector:
Phylum:	Firmicutes
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 6 sites [see more]

Member of regulog collections

By taxonomy - Bacillales
By TF family - LacI
By pathway - Maltose utilization

Statistics of regulated genes
Genome	Genes	Operons
Anoxybacillus flavithermus WK1
Bacillus amyloliquefaciens FZB42
Bacillus cereus ATCC 14579
Bacillus clausii KSM-K16	3	1
Bacillus halodurans C-125	3	3
Bacillus licheniformis DSM 13
Bacillus pumilus SAFR-032
Bacillus subtilis subsp. subtilis str. 168
Geobacillus kaustophilus HTA426
Oceanobacillus iheyensis HTE831
Paenibacillus sp. JDR-2

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes												Function

CRON 1.
BH1516	Anoxybacillus flavithermus WK1	Bacillus amyloliquefaciens FZB42	Bacillus cereus ATCC 14579	Bacillus clausii KSM-K16 Gene: ABC3478: Putative maltose catabolism transcriptional regulator, LacI family	* Bacillus halodurans C-125 Site: position = -34 score = 5.96819 sequence = CACAGAAAACGTTTTCGTTT Gene: BH1516: Putative maltose catabolism transcriptional regulator, LacI family	Bacillus licheniformis DSM 13	Bacillus pumilus SAFR-032	Bacillus subtilis subsp. subtilis str. 168	Geobacillus kaustophilus HTA426	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_5046: Putative maltose catabolism transcriptional regulator, LacI family	Putative maltose catabolism transcriptional regulator, LacI family

CRON 2.
msmE	Anoxybacillus flavithermus WK1	Bacillus amyloliquefaciens FZB42	Bacillus cereus ATCC 14579	* Bacillus clausii KSM-K16 Site: position = 35 score = 6.25033 sequence = TAACGTAAACGTTTACTATA Site: position = 4 score = 5.60251 sequence = ATACGAAAACGTTTACTCCC Gene: ABC3496: Multiple sugar ABC transporter, substrate-binding protein	Bacillus halodurans C-125	Bacillus licheniformis DSM 13	Bacillus pumilus SAFR-032	Bacillus subtilis subsp. subtilis str. 168	Geobacillus kaustophilus HTA426	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Multiple sugar ABC transporter, substrate-binding protein
msmF	Anoxybacillus flavithermus WK1	Bacillus amyloliquefaciens FZB42	Bacillus cereus ATCC 14579	Bacillus clausii KSM-K16 Gene: ABC3497: Multiple sugar ABC transporter, membrane-spanning permease protein MsmF	Bacillus halodurans C-125	Bacillus licheniformis DSM 13	Bacillus pumilus SAFR-032	Bacillus subtilis subsp. subtilis str. 168	Geobacillus kaustophilus HTA426	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Multiple sugar ABC transporter, membrane-spanning permease protein MsmF
msmG	Anoxybacillus flavithermus WK1	Bacillus amyloliquefaciens FZB42	Bacillus cereus ATCC 14579	Bacillus clausii KSM-K16 Gene: ABC3498: Multiple sugar ABC transporter, membrane-spanning permease protein MsmG	Bacillus halodurans C-125	Bacillus licheniformis DSM 13	Bacillus pumilus SAFR-032	Bacillus subtilis subsp. subtilis str. 168	Geobacillus kaustophilus HTA426	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Multiple sugar ABC transporter, membrane-spanning permease protein MsmG

CRON 3.
malL	Anoxybacillus flavithermus WK1 Gene: Aflv_2271: Oligo-1,6-glucosidase (EC 3.2.1.10)	Bacillus amyloliquefaciens FZB42	Bacillus cereus ATCC 14579 Gene: BC4015: Oligo-1,6-glucosidase (EC 3.2.1.10)	Bacillus clausii KSM-K16	* Bacillus halodurans C-125 Site: position = -113 score = 5.87109 sequence = TCACGTAAACGTTTTCTCTC Site: position = -32 score = 6.34609 sequence = TTACGTAAACGTTTTCGTTA Gene: BH2903: Oligo-1,6-glucosidase (EC 3.2.1.10)	Bacillus licheniformis DSM 13	Bacillus pumilus SAFR-032	Bacillus subtilis subsp. subtilis str. 168	Geobacillus kaustophilus HTA426	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Oligo-1,6-glucosidase (EC 3.2.1.10)

CRON 4.
amyA	Anoxybacillus flavithermus WK1	Bacillus amyloliquefaciens FZB42	Bacillus cereus ATCC 14579	Bacillus clausii KSM-K16 Gene: ABC1611: Alpha-amylase protein	* Bacillus halodurans C-125 Site: position = -104 score = 6.50111 sequence = AAAAGTAAACGTTTTCTTTT Gene: BH0413: Alpha-amylase protein	Bacillus licheniformis DSM 13	Bacillus pumilus SAFR-032	Bacillus subtilis subsp. subtilis str. 168	Geobacillus kaustophilus HTA426	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Alpha-amylase protein

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog BH1516 - Bacillales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --