Statistics of regulated genes

Genome	Genes	Operons
Arthrobacter aurescens TC1	6	2
Arthrobacter chlorophenolicus A6
Arthrobacter sp. FB24	6	2
Beutenbergia cavernae DSM 12333
Brachybacterium faecium DSM 4810	3	1
Brevibacterium linens BL2
Clavibacter michiganensis subsp. michiganensis NCPPB 382
Janibacter sp. HTCC2649
Jonesia denitrificans DSM 20603
Kocuria rhizophila DC2201
Kytococcus sedentarius DSM 20547
Leifsonia xyli subsp. xyli str. CTCB07
Renibacterium salmoninarum ATCC 33209
Tropheryma whipplei str. Twist

Clusters of co-Regulated Orthologous operoNs (CRONs)

Genes															Function
CRON 1.
msmE	* Arthrobacter aurescens TC1 Site: position = -59 score = 6.4015 sequence = TCATCGATACGCATCGTCGA Site: position = -46 score = 6.54515 sequence = TCGTCGATACGCATCGATAA Gene: AAur_3251: Multiple sugar ABC transporter, substrate-binding protein	Arthrobacter chlorophenolicus A6	* Arthrobacter sp. FB24 Site: position = -48 score = 6.54515 sequence = TTGTCGATACGCATCGATGA Gene: Arth_3465: Multiple sugar ABC transporter, substrate-binding protein	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	Multiple sugar ABC transporter, substrate-binding protein
msmF	Arthrobacter aurescens TC1 Gene: AAur_3252: Multiple sugar ABC transporter, permease protein 1	Arthrobacter chlorophenolicus A6	Arthrobacter sp. FB24 Gene: Arth_3466: Multiple sugar ABC transporter, permease protein 1	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	Multiple sugar ABC transporter, permease protein 1
msmG	Arthrobacter aurescens TC1 Gene: AAur_3253: Multiple sugar ABC transporter, permease protein 2	Arthrobacter chlorophenolicus A6	Arthrobacter sp. FB24 Gene: Arth_3467: Multiple sugar ABC transporter, permease protein 2	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	Multiple sugar ABC transporter, permease protein 2
thuA	Arthrobacter aurescens TC1 Gene: AAur_3254: Trehalose utilization protein	Arthrobacter chlorophenolicus A6	Arthrobacter sp. FB24 Gene: Arth_3468: Trehalose utilization protein	Beutenbergia cavernae DSM 12333 Gene: Bcav_1145: Trehalose utilization protein	* Brachybacterium faecium DSM 4810 Site: position = -47 score = 5.6433 sequence = GCATCGATTCGAATCGATGC Gene: Bfae_17810: Trehalose utilization protein	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382 Gene: CMM_0273: Trehalose utilization protein	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	Trehalose utilization protein
AAur_3255	Arthrobacter aurescens TC1 Gene: AAur_3255: putative dehydrogenase	Arthrobacter chlorophenolicus A6	Arthrobacter sp. FB24 Gene: Arth_3469: putative dehydrogenase	Beutenbergia cavernae DSM 12333 Gene: Bcav_1146: putative dehydrogenase	Brachybacterium faecium DSM 4810 Gene: Bfae_17800: putative dehydrogenase	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382 Gene: CMM_0274: putative dehydrogenase	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	putative dehydrogenase
msmR	* Arthrobacter aurescens TC1 Site: position = -75 score = 6.43315 sequence = TTCTCGATGCGCATCGACGA Site: position = -62 score = 6.36638 sequence = TCGACGATACGCATCGACAA Gene: AAur_3250: Multiple sugar utilization transcriptional regulator MsmR, LacI family	Arthrobacter chlorophenolicus A6	* Arthrobacter sp. FB24 Site: position = -117 score = 6.3887 sequence = TTCTCGATACGCATCGACGA Site: position = -104 score = 6.32192 sequence = TCGACGATACGCATCGATAA Gene: Arth_3464: Multiple sugar utilization transcriptional regulator MsmR, LacI family	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810 Gene: Bfae_17790: Multiple sugar utilization transcriptional regulator MsmR, LacI family	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	Multiple sugar utilization transcriptional regulator MsmR, LacI family

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