Regulog BPSL1304 - Burkholderia

Properties
Regulator type:	Transcription factor
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	Sugar utilization
Effector:
Phylum:	Proteobacteria/beta
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 11 sites [see more]

Member of regulog collections

By taxonomy - Burkholderia
By TF family - LacI
By pathway - Sugar utilization

Statistics of regulated genes
Genome	Genes	Operons
Burkholderia cepacia AMMD	6	1
Burkholderia glumae BGR1	6	1
Burkholderia mallei ATCC 23344	6	2
Burkholderia phymatum STM815	6	1
Burkholderia pseudomallei K96243	6	2
Burkholderia sp. 383	6	1
Burkholderia vietnamiensis G4	6	1
Burkholderia xenovorans LB400	6	2

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes									Function

CRON 1.
BPSL1304	* Burkholderia cepacia AMMD Site: position = -29 score = 6.16663 sequence = GGTCGAAAACGTTTACATCG Gene: Bamb_1118: Predicted sugar utilization transcriptional regulator, LacI family	* Burkholderia glumae BGR1 Site: position = -28 score = 5.38659 sequence = CCATGGAAACGATTACAGCG Gene: bglu_1g10520: Predicted sugar utilization transcriptional regulator, LacI family	* Burkholderia mallei ATCC 23344 Site: position = -36 score = 6.00298 sequence = CGACGAAAACGTTTACACGC Gene: BMA3070: Predicted sugar utilization transcriptional regulator, LacI family	* Burkholderia phymatum STM815 Site: position = -68 score = 5.43583 sequence = CTGCGAAAACGTTTACAACA Gene: Bphy_1500: Predicted sugar utilization transcriptional regulator, LacI family	* Burkholderia pseudomallei K96243 Site: position = -36 score = 6.00298 sequence = CGACGAAAACGTTTACACGC Gene: BPSL1304: Predicted sugar utilization transcriptional regulator, LacI family	* Burkholderia sp. 383 Site: position = -29 score = 6.16663 sequence = GGCCGAAAACGTTTACATCG Gene: Bcep18194_A4344: Predicted sugar utilization transcriptional regulator, LacI family	* Burkholderia vietnamiensis G4 Site: position = -29 score = 6.27709 sequence = CGCCGAAAACGTTTACATCG Gene: Bcep1808_1143: Predicted sugar utilization transcriptional regulator, LacI family	* Burkholderia xenovorans LB400 Site: position = -33 score = 5.57126 sequence = TCACGAAAACGTTTACGAGC Gene: Bxe_A1469: Predicted sugar utilization transcriptional regulator, LacI family	Predicted sugar utilization transcriptional regulator, LacI family
RSc1791	Burkholderia cepacia AMMD Gene: Bamb_1117: Predicted sugar ABC transporter, substrate-binding protein	Burkholderia glumae BGR1 Gene: bglu_1g10510: Predicted sugar ABC transporter, substrate-binding protein	Burkholderia mallei ATCC 23344 Gene: BMA3071: Predicted sugar ABC transporter, substrate-binding protein	Burkholderia phymatum STM815 Gene: Bphy_1501: Predicted sugar ABC transporter, substrate-binding protein	Burkholderia pseudomallei K96243 Gene: BPSL1303: Predicted sugar ABC transporter, substrate-binding protein	Burkholderia sp. 383 Gene: Bcep18194_A4343: Predicted sugar ABC transporter, substrate-binding protein	Burkholderia vietnamiensis G4 Gene: Bcep1808_1142: Predicted sugar ABC transporter, substrate-binding protein	* Burkholderia xenovorans LB400 Site: position = -138 score = 6.36578 sequence = CGACGAAAACGTTTACATCC Gene: Bxe_A1468: Predicted sugar ABC transporter, substrate-binding protein	Predicted sugar ABC transporter, substrate-binding protein
RSc1792	Burkholderia cepacia AMMD Gene: Bamb_1116: Predicted sugar ABC transporter, permease protein 1	Burkholderia glumae BGR1 Gene: bglu_1g10500: Predicted sugar ABC transporter, permease protein 1	Burkholderia mallei ATCC 23344 Gene: BMA3072: Predicted sugar ABC transporter, permease protein 1	Burkholderia phymatum STM815 Gene: Bphy_1502: Predicted sugar ABC transporter, permease protein 1	Burkholderia pseudomallei K96243 Gene: BPSL1302: Predicted sugar ABC transporter, permease protein 1	Burkholderia sp. 383 Gene: Bcep18194_A4342: Predicted sugar ABC transporter, permease protein 1	Burkholderia vietnamiensis G4 Gene: Bcep1808_1141: Predicted sugar ABC transporter, permease protein 1	Burkholderia xenovorans LB400 Gene: Bxe_A1467: Predicted sugar ABC transporter, permease protein 1	Predicted sugar ABC transporter, permease protein 1
RSc1793	Burkholderia cepacia AMMD Gene: Bamb_1115: Predicted sugar ABC transporter, permease protein 2	Burkholderia glumae BGR1 Gene: bglu_1g10490: Predicted sugar ABC transporter, permease protein 2	* Burkholderia mallei ATCC 23344 Site: position = -205 score = 6.47624 sequence = CGACGAAAACGTTTACATCG Gene: BMA3075: Predicted sugar ABC transporter, permease protein 2	Burkholderia phymatum STM815 Gene: Bphy_1503: Predicted sugar ABC transporter, permease protein 2	* Burkholderia pseudomallei K96243 Site: position = -34 score = 6.47624 sequence = CGACGAAAACGTTTACATCG Gene: BPSL1301: Predicted sugar ABC transporter, permease protein 2	Burkholderia sp. 383 Gene: Bcep18194_A4341: Predicted sugar ABC transporter, permease protein 2	Burkholderia vietnamiensis G4 Gene: Bcep1808_1140: Predicted sugar ABC transporter, permease protein 2	Burkholderia xenovorans LB400 Gene: Bxe_A1466: Predicted sugar ABC transporter, permease protein 2	Predicted sugar ABC transporter, permease protein 2
RSc1794	Burkholderia cepacia AMMD Gene: Bamb_1114: Predicted sugar ABC transporter, ATP-binding protein	Burkholderia glumae BGR1 Gene: bglu_1g10480: Predicted sugar ABC transporter, ATP-binding protein	Burkholderia mallei ATCC 23344 Gene: BMA3076: Predicted sugar ABC transporter, ATP-binding protein	Burkholderia phymatum STM815 Gene: Bphy_1504: Predicted sugar ABC transporter, ATP-binding protein	Burkholderia pseudomallei K96243 Gene: BPSL1300: Predicted sugar ABC transporter, ATP-binding protein	Burkholderia sp. 383 Gene: Bcep18194_A4340: Predicted sugar ABC transporter, ATP-binding protein	Burkholderia vietnamiensis G4 Gene: Bcep1808_1139: Predicted sugar ABC transporter, ATP-binding protein	Burkholderia xenovorans LB400 Gene: Bxe_A1465: Predicted sugar ABC transporter, ATP-binding protein	Predicted sugar ABC transporter, ATP-binding protein
RSc1795	Burkholderia cepacia AMMD Gene: Bamb_1113: 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17)	Burkholderia glumae BGR1 Gene: bglu_1g10470: 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17)	Burkholderia mallei ATCC 23344 Gene: BMA3077: 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17)	Burkholderia phymatum STM815 Gene: Bphy_1505: 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17)	Burkholderia pseudomallei K96243 Gene: BPSL1299: 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17)	Burkholderia sp. 383 Gene: Bcep18194_A4339: 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17)	Burkholderia vietnamiensis G4 Gene: Bcep1808_1138: 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17)	Burkholderia xenovorans LB400 Gene: Bxe_A1464: 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17)	3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog BPSL1304 - Burkholderia

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --