Regulog BPSL1304 - Burkholderia
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Sugar utilization |
| Effector: | |
| Phylum: | Proteobacteria/beta |
| Visualization: | |
|
Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Burkholderia
- By TF family - LacI
- By pathway - Sugar utilization
| Genome | Genes | Operons |
|---|---|---|
| Burkholderia cepacia AMMD | 6 | 1 |
| Burkholderia glumae BGR1 | 6 | 1 |
| Burkholderia mallei ATCC 23344 | 6 | 2 |
| Burkholderia phymatum STM815 | 6 | 1 |
| Burkholderia pseudomallei K96243 | 6 | 2 |
| Burkholderia sp. 383 | 6 | 1 |
| Burkholderia vietnamiensis G4 | 6 | 1 |
| Burkholderia xenovorans LB400 | 6 | 2 |
| Genes | Function | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||
| BPSL1304 |
*
Burkholderia cepacia AMMD Site: position = -29 score = 6.16663 sequence = GGTCGAAAACGTTTACATCG Gene: Bamb_1118: Predicted sugar utilization transcriptional regulator, LacI family |
*
Burkholderia glumae BGR1 Site: position = -28 score = 5.38659 sequence = CCATGGAAACGATTACAGCG Gene: bglu_1g10520: Predicted sugar utilization transcriptional regulator, LacI family |
*
Burkholderia mallei ATCC 23344 Site: position = -36 score = 6.00298 sequence = CGACGAAAACGTTTACACGC Gene: BMA3070: Predicted sugar utilization transcriptional regulator, LacI family |
*
Burkholderia phymatum STM815 Site: position = -68 score = 5.43583 sequence = CTGCGAAAACGTTTACAACA Gene: Bphy_1500: Predicted sugar utilization transcriptional regulator, LacI family |
*
Burkholderia pseudomallei K96243 Site: position = -36 score = 6.00298 sequence = CGACGAAAACGTTTACACGC Gene: BPSL1304: Predicted sugar utilization transcriptional regulator, LacI family |
*
Burkholderia sp. 383 Site: position = -29 score = 6.16663 sequence = GGCCGAAAACGTTTACATCG Gene: Bcep18194_A4344: Predicted sugar utilization transcriptional regulator, LacI family |
*
Burkholderia vietnamiensis G4 Site: position = -29 score = 6.27709 sequence = CGCCGAAAACGTTTACATCG Gene: Bcep1808_1143: Predicted sugar utilization transcriptional regulator, LacI family |
*
Burkholderia xenovorans LB400 Site: position = -33 score = 5.57126 sequence = TCACGAAAACGTTTACGAGC Gene: Bxe_A1469: Predicted sugar utilization transcriptional regulator, LacI family |
Predicted sugar utilization transcriptional regulator, LacI family |
| RSc1791 |
Gene: Bamb_1117: Predicted sugar ABC transporter, substrate-binding protein |
Gene: bglu_1g10510: Predicted sugar ABC transporter, substrate-binding protein |
Gene: BMA3071: Predicted sugar ABC transporter, substrate-binding protein |
Gene: Bphy_1501: Predicted sugar ABC transporter, substrate-binding protein |
Gene: BPSL1303: Predicted sugar ABC transporter, substrate-binding protein |
Gene: Bcep18194_A4343: Predicted sugar ABC transporter, substrate-binding protein |
Gene: Bcep1808_1142: Predicted sugar ABC transporter, substrate-binding protein |
*
Burkholderia xenovorans LB400 Site: position = -138 score = 6.36578 sequence = CGACGAAAACGTTTACATCC Gene: Bxe_A1468: Predicted sugar ABC transporter, substrate-binding protein |
Predicted sugar ABC transporter, substrate-binding protein |
| RSc1792 |
Gene: Bamb_1116: Predicted sugar ABC transporter, permease protein 1 |
Gene: bglu_1g10500: Predicted sugar ABC transporter, permease protein 1 |
Gene: BMA3072: Predicted sugar ABC transporter, permease protein 1 |
Gene: Bphy_1502: Predicted sugar ABC transporter, permease protein 1 |
Gene: BPSL1302: Predicted sugar ABC transporter, permease protein 1 |
Gene: Bcep18194_A4342: Predicted sugar ABC transporter, permease protein 1 |
Gene: Bcep1808_1141: Predicted sugar ABC transporter, permease protein 1 |
Gene: Bxe_A1467: Predicted sugar ABC transporter, permease protein 1 |
Predicted sugar ABC transporter, permease protein 1 |
| RSc1793 |
Gene: Bamb_1115: Predicted sugar ABC transporter, permease protein 2 |
Gene: bglu_1g10490: Predicted sugar ABC transporter, permease protein 2 |
*
Burkholderia mallei ATCC 23344 Site: position = -205 score = 6.47624 sequence = CGACGAAAACGTTTACATCG Gene: BMA3075: Predicted sugar ABC transporter, permease protein 2 |
Gene: Bphy_1503: Predicted sugar ABC transporter, permease protein 2 |
*
Burkholderia pseudomallei K96243 Site: position = -34 score = 6.47624 sequence = CGACGAAAACGTTTACATCG Gene: BPSL1301: Predicted sugar ABC transporter, permease protein 2 |
Gene: Bcep18194_A4341: Predicted sugar ABC transporter, permease protein 2 |
Gene: Bcep1808_1140: Predicted sugar ABC transporter, permease protein 2 |
Gene: Bxe_A1466: Predicted sugar ABC transporter, permease protein 2 |
Predicted sugar ABC transporter, permease protein 2 |
| RSc1794 |
Gene: Bamb_1114: Predicted sugar ABC transporter, ATP-binding protein |
Gene: bglu_1g10480: Predicted sugar ABC transporter, ATP-binding protein |
Gene: BMA3076: Predicted sugar ABC transporter, ATP-binding protein |
Gene: Bphy_1504: Predicted sugar ABC transporter, ATP-binding protein |
Gene: BPSL1300: Predicted sugar ABC transporter, ATP-binding protein |
Gene: Bcep18194_A4340: Predicted sugar ABC transporter, ATP-binding protein |
Gene: Bcep1808_1139: Predicted sugar ABC transporter, ATP-binding protein |
Gene: Bxe_A1465: Predicted sugar ABC transporter, ATP-binding protein |
Predicted sugar ABC transporter, ATP-binding protein |
| RSc1795 |
Gene: Bamb_1113: 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) |
Gene: bglu_1g10470: 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) |
Gene: BMA3077: 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) |
Gene: Bphy_1505: 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) |
Gene: BPSL1299: 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) |
Gene: Bcep18194_A4339: 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) |
Gene: Bcep1808_1138: 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) |
Gene: Bxe_A1464: 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) |
3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |