Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog Mce2R - Nocardiaceae

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: Fatty acid metabolism
Effector:
Phylum: Actinobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 6 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Nocardia farcinica IFM 10152 3 2
Rhodococcus erythropolis PR4 2 1
Rhodococcus opacus B4 2 1
Rhodococcus sp. RHA1 2 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
mce2R
*2
Nocardia farcinica IFM 10152

Site:
position = -54
score = 4.84458
sequence = CAAACTGGTCCAACCAGTTGA

Gene: nfa16280: Transcriptional regulator, GntR family

Site:
position = -68
score = 4.65431
sequence = GCAATTGGTCTTACCACGATT

Site:
position = -53
score = 5.65713
sequence = ACGATTGGTCTTACCACTTGA

Gene: nfa1630: Transcriptional regulator, GntR family
*
Rhodococcus erythropolis PR4

Site:
position = -52
score = 5.83614
sequence = CTAACTGGTCATACCACTTGA

Gene: RER_01500: Transcriptional regulator, GntR family
*
Rhodococcus opacus B4

Site:
position = -53
score = 5.63599
sequence = CGCACTGGTAAGACCACTTGA

Gene: ROP_07730: Transcriptional regulator, GntR family
*
Rhodococcus sp. RHA1

Site:
position = -48
score = 5.79739
sequence = TGCACTGGTAAGACCACTTGA

Gene: RHA1_ro01046: Transcriptional regulator, GntR family
Transcriptional regulator, GntR family
fah
 
Nocardia farcinica IFM 10152

Gene: nfa1620: Fatty acid hydroxylase FAH1P
 
Rhodococcus erythropolis PR4

Gene: RER_01490: Fatty acid hydroxylase FAH1P
 
Rhodococcus opacus B4

Gene: ROP_07740: Fatty acid hydroxylase FAH1P
 
Rhodococcus sp. RHA1

Gene: RHA1_ro01047: Fatty acid hydroxylase FAH1P
Fatty acid hydroxylase FAH1P
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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