Regulog PdxR2 - Xanthomonadales

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Pyridoxine/pyridoxal homeostasis
Effector:	Pyridoxal-5-phosphate
Phylum:	Proteobacteria/gamma
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 2 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Stenotrophomonas maltophilia K279a	3	2
Xanthomonas axonopodis pv. citri str. 306
Xanthomonas campestris pv. campestris str. ATCC 33913
Xylella fastidiosa 9a5c

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes					Function

CRON 1.
pdxR2	* Stenotrophomonas maltophilia K279a Site: position = -16 score = 5.73391 sequence = TTTGGCATAGGACAAA Gene: Smlt2930: Predicted transcriptional regulator of pyridoxine metabolism, GntR/MocR family	Xanthomonas axonopodis pv. citri str. 306	Xanthomonas campestris pv. campestris str. ATCC 33913	Xylella fastidiosa 9a5c	Predicted transcriptional regulator of pyridoxine metabolism, GntR/MocR family

CRON 2.
COG0325	* Stenotrophomonas maltophilia K279a Site: position = -76 score = 5.73391 sequence = TTTGTCCTATGCCAAA Gene: Smlt2931: Predicted pyridoxal phosphate-dependent enzyme, YBL036C type	Xanthomonas axonopodis pv. citri str. 306	Xanthomonas campestris pv. campestris str. ATCC 33913	Xylella fastidiosa 9a5c Gene: XF1717: Predicted pyridoxal phosphate-dependent enzyme, YBL036C type	Predicted pyridoxal phosphate-dependent enzyme, YBL036C type
COG0518	Stenotrophomonas maltophilia K279a Gene: Smlt2932: Putative glutamine amidotransferase-like protein	Xanthomonas axonopodis pv. citri str. 306	Xanthomonas campestris pv. campestris str. ATCC 33913	Xylella fastidiosa 9a5c	Putative glutamine amidotransferase-like protein

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --