Regulog PdxR2 - Alcaligenaceae
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | Pyridoxine/pyridoxal homeostasis |
| Effector: | Pyridoxal-5-phosphate |
| Phylum: | Proteobacteria/Beta |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Alcaligenaceae
- By trascription factor - PdxR
- By TF family - GntR/MocR
- By effector - Pyridoxal-5-phosphate
- By pathway - Pyridoxine/pyridoxal homeostasis
| Genome | Genes | Operons |
|---|---|---|
| Bordetella avium 197N | 2 | 1 |
| Bordetella bronchiseptica RB50 | 3 | 2 |
| Bordetella petrii DSM 12804 |
| Genes | Function | |||
|---|---|---|---|---|
| CRON 1. | ||||
| COG0325 |
*
Bordetella avium 197N Site: position = -71 score = 5.71521 sequence = TTTGACCTAGGACAAA Gene: BAV1600: Predicted pyridoxal phosphate-dependent enzyme, YBL036C type |
*
Bordetella bronchiseptica RB50 Site: position = -38 score = 5.97494 sequence = TTTGTCATAGGACAAA Gene: BB2871: Predicted pyridoxal phosphate-dependent enzyme, YBL036C type |
Gene: Bpet2896: Predicted pyridoxal phosphate-dependent enzyme, YBL036C type |
Predicted pyridoxal phosphate-dependent enzyme, YBL036C type |
| pdxK |
Gene: BAV1601: Pyridoxal kinase (EC 2.7.1.35) |
Gene: BB2870: Pyridoxal kinase (EC 2.7.1.35) |
Gene: Bpet2897: Pyridoxal kinase (EC 2.7.1.35) |
Pyridoxal kinase (EC 2.7.1.35) |
| CRON 2. | ||||
| pdxR2 |
Gene: BAV1602: Predicted transcriptional regulator of pyridoxine metabolism, GntR/MocR family |
*
Bordetella bronchiseptica RB50 Site: position = -37 score = 5.97494 sequence = TTTGTCCTATGACAAA Gene: BB2872: Predicted transcriptional regulator of pyridoxine metabolism, GntR/MocR family |
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Predicted transcriptional regulator of pyridoxine metabolism, GntR/MocR family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |