Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog VF_1255 - Vibrionales

Properties
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Sugar utilization
Effector:
Phylum: Proteobacteria/gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 5 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Vibrio harveyi ATCC BAA-1116
Vibrio angustum S14
Vibrio cholerae O1 biovar eltor str. N16961
Vibrio fischeri ES114 2 1
Vibrio parahaemolyticus RIMD 2210633
Photobacterium profundum SS9 2 1
Vibrio salmonicida LFI1238 2 1
Vibrio shilonii AK1 2 1
Vibrio splendidus LGP32
Vibrio vulnificus CMCP6 2 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
nhaX
 
Vibrio harveyi ATCC BAA-1116
 
Vibrio angustum S14
 
Vibrio cholerae O1 biovar eltor str. N16961
*
Vibrio fischeri ES114

Site:
position = -116
score = 7.51604
sequence = TTCATGTAAGCGCTTACATGAG

Gene: VF_1254: Predicted sugar transporter, Na+/H+ antiporter family
 
Vibrio parahaemolyticus RIMD 2210633
*
Photobacterium profundum SS9

Site:
position = -134
score = 7.58068
sequence = CTCATGTAACCGCTTACATGAA

Gene: PBPRA2147: Predicted sugar transporter, Na+/H+ antiporter family
*
Vibrio salmonicida LFI1238

Site:
position = -116
score = 7.66497
sequence = CCCATGTAAGCGCTTACATGAG

Gene: VSAL_I1609: Predicted sugar transporter, Na+/H+ antiporter family
*
Vibrio shilonii AK1

Site:
position = -108
score = 7.79426
sequence = CTCATGTAAGCGCTTACATGAA

Gene: VSAK1_02689: Predicted sugar transporter, Na+/H+ antiporter family
 
Vibrio splendidus LGP32
*
Vibrio vulnificus CMCP6

Site:
position = -109
score = 7.72962
sequence = CCCATGTAAGCGCTTACATGAA

Gene: VV21061: Predicted sugar transporter, Na+/H+ antiporter family
Predicted sugar transporter, Na+/H+ antiporter family
malY
 
Vibrio harveyi ATCC BAA-1116
 
Vibrio angustum S14
 
Vibrio cholerae O1 biovar eltor str. N16961
 
Vibrio fischeri ES114

Gene: VF_1253: beta-cystathionase; Maltose regulon modulator
 
Vibrio parahaemolyticus RIMD 2210633
 
Photobacterium profundum SS9

Gene: PBPRA2148: beta-cystathionase; Maltose regulon modulator
 
Vibrio salmonicida LFI1238

Gene: VSAL_I1610: beta-cystathionase; Maltose regulon modulator
 
Vibrio shilonii AK1

Gene: VSAK1_02694: beta-cystathionase; Maltose regulon modulator
 
Vibrio splendidus LGP32
 
Vibrio vulnificus CMCP6

Gene: VV21062: beta-cystathionase; Maltose regulon modulator
beta-cystathionase; Maltose regulon modulator
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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