Regulog Bamb_2736 - Burkholderia

Properties
Regulator type:	Transcription factor
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	Sugar utilization
Effector:
Phylum:	Proteobacteria/beta
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 4 sites [see more]

Member of regulog collections

By taxonomy - Burkholderia
By TF family - LacI
By pathway - Sugar utilization

Statistics of regulated genes
Genome	Genes	Operons
Burkholderia phymatum STM815
Burkholderia cepacia AMMD	5	2
Burkholderia glumae BGR1
Burkholderia mallei ATCC 23344
Burkholderia pseudomallei K96243
Burkholderia sp. 383	4	2
Burkholderia vietnamiensis G4
Burkholderia xenovorans LB400

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes									Function

CRON 1.
SSF51658	Burkholderia phymatum STM815	* Burkholderia cepacia AMMD Site: position = -92 score = 6.28597 sequence = ATTGGCGATTTTTCGTCAAC Gene: Bamb_2737: Xylose isomerase-like, TIM barrel domain	Burkholderia glumae BGR1	Burkholderia mallei ATCC 23344	Burkholderia pseudomallei K96243	* Burkholderia sp. 383 Site: position = -27 score = 6.28597 sequence = ATTGGCGATTTTTCGTCAAC Gene: Bcep18194_A6012: Xylose isomerase-like, TIM barrel domain	Burkholderia vietnamiensis G4	Burkholderia xenovorans LB400	Xylose isomerase-like, TIM barrel domain
COG4130	Burkholderia phymatum STM815	Burkholderia cepacia AMMD Gene: Bamb_2738: Putative inosose isomerase	Burkholderia glumae BGR1	Burkholderia mallei ATCC 23344	Burkholderia pseudomallei K96243	Burkholderia sp. 383 Gene: Bcep18194_A6013: Putative inosose isomerase	Burkholderia vietnamiensis G4	Burkholderia xenovorans LB400	Putative inosose isomerase
Bamb_2739	Burkholderia phymatum STM815	Burkholderia cepacia AMMD Gene: Bamb_2739: Hypothetical protein	Burkholderia glumae BGR1	Burkholderia mallei ATCC 23344	Burkholderia pseudomallei K96243	Burkholderia sp. 383	Burkholderia vietnamiensis G4	Burkholderia xenovorans LB400	Hypothetical protein
iolG	Burkholderia phymatum STM815 Gene: Bphy_1595: Predicted myo-inositol 2-dehydrogenase	Burkholderia cepacia AMMD Gene: Bamb_2740: Predicted myo-inositol 2-dehydrogenase	Burkholderia glumae BGR1 Gene: bglu_1g21990: Predicted myo-inositol 2-dehydrogenase	Burkholderia mallei ATCC 23344 Gene: BMA0918: Predicted myo-inositol 2-dehydrogenase	Burkholderia pseudomallei K96243 Gene: BPSL1989: Predicted myo-inositol 2-dehydrogenase	Burkholderia sp. 383 Gene: Bcep18194_A6014: Predicted myo-inositol 2-dehydrogenase	Burkholderia vietnamiensis G4	Burkholderia xenovorans LB400 Gene: Bxe_A1331: Predicted myo-inositol 2-dehydrogenase	Predicted myo-inositol 2-dehydrogenase

CRON 2.
Bamb_2736	Burkholderia phymatum STM815	* Burkholderia cepacia AMMD Site: position = -51 score = 6.63952 sequence = GTTGACGAAATTTCGCCATC Gene: Bamb_2736: Predicted sugar utilization transcriptional regulator, LacI family	Burkholderia glumae BGR1	Burkholderia mallei ATCC 23344	Burkholderia pseudomallei K96243	* Burkholderia sp. 383 Site: position = -77 score = 6.63952 sequence = GTTGACGAAATTTCGCCATC Gene: Bcep18194_A6011: Predicted sugar utilization transcriptional regulator, LacI family	Burkholderia vietnamiensis G4	Burkholderia xenovorans LB400	Predicted sugar utilization transcriptional regulator, LacI family

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog Bamb_2736 - Burkholderia

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --