Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog Lmo0031 - Listeriaceae

Properties
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Sugar utilization
Effector:
Phylum: Firmicutes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 8 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Listeria innocua Clip11262 6 2
Listeria monocytogenes EGD-e 6 2
Listeria seeligeri serovar 1/2b str. SLCC3954
Listeria welshimeri serovar 6b str. SLCC5334
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
lmo0032
*
Listeria innocua Clip11262

Site:
position = -129
score = 7.11087
sequence = ATTTGGTAACGTTATCAAAA

Site:
position = -34
score = 7.27003
sequence = ATTTGGTAACGTTACCAAAA

Gene: lin0031: Putative sugar kinase, ROK family
*
Listeria monocytogenes EGD-e

Site:
position = -129
score = 7.18571
sequence = TTTTGGTAACGTTATCAAAA

Site:
position = -34
score = 7.27003
sequence = ATTTGGTAACGTTACCAAAA

Gene: lmo0032: Putative sugar kinase, ROK family
 
Listeria seeligeri serovar 1/2b str. SLCC3954
 
Listeria welshimeri serovar 6b str. SLCC5334
Putative sugar kinase, ROK family
lmo0033
 
Listeria innocua Clip11262

Gene: lin0032: glycosyl hydrolase, family 9
 
Listeria monocytogenes EGD-e

Gene: lmo0033: glycosyl hydrolase, family 9
 
Listeria seeligeri serovar 1/2b str. SLCC3954
 
Listeria welshimeri serovar 6b str. SLCC5334
glycosyl hydrolase, family 9
lmo0034
 
Listeria innocua Clip11262

Gene: lin0033: Putative sugar PTS system, IIC component
 
Listeria monocytogenes EGD-e

Gene: lmo0034: Putative sugar PTS system, IIC component
 
Listeria seeligeri serovar 1/2b str. SLCC3954
 
Listeria welshimeri serovar 6b str. SLCC5334
Putative sugar PTS system, IIC component
lmo0035
 
Listeria innocua Clip11262

Gene: lin0034: putative sugar-6-phosphate aminotransferase
 
Listeria monocytogenes EGD-e

Gene: lmo0035: putative sugar-6-phosphate aminotransferase
 
Listeria seeligeri serovar 1/2b str. SLCC3954
 
Listeria welshimeri serovar 6b str. SLCC5334
putative sugar-6-phosphate aminotransferase
 
CRON 2.
lmo0031
*
Listeria innocua Clip11262

Site:
position = -92
score = 7.11087
sequence = TTTTGATAACGTTACCAAAT

Site:
position = -187
score = 7.27003
sequence = TTTTGGTAACGTTACCAAAT

Gene: lin0030: Putative sugar utilization transcriptional regulator LacI family
*
Listeria monocytogenes EGD-e

Site:
position = -92
score = 7.18571
sequence = TTTTGATAACGTTACCAAAA

Site:
position = -187
score = 7.27003
sequence = TTTTGGTAACGTTACCAAAT

Gene: lmo0031: Putative sugar utilization transcriptional regulator LacI family
 
Listeria seeligeri serovar 1/2b str. SLCC3954
 
Listeria welshimeri serovar 6b str. SLCC5334
Putative sugar utilization transcriptional regulator LacI family
lmo0030
 
Listeria innocua Clip11262

Gene: lin0029: hydrolase, haloacid dehalogenase-like family
 
Listeria monocytogenes EGD-e

Gene: lmo0030: hydrolase, haloacid dehalogenase-like family
 
Listeria seeligeri serovar 1/2b str. SLCC3954
 
Listeria welshimeri serovar 6b str. SLCC5334
hydrolase, haloacid dehalogenase-like family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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