Regulog SCO4158 - Streptomycetaceae
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Nucleoside utilization |
| Effector: | |
| Phylum: | Actinobacteria |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Streptomycetaceae
- By TF family - LacI
- By pathway - Nucleoside utilization
| Genome | Genes | Operons |
|---|---|---|
| Streptomyces scabiei 87.22 | 5 | 3 |
| Streptomyces griseus subsp. griseus NBRC 13350 | 5 | 3 |
| Streptomyces coelicolor A3(2) | 5 | 3 |
| Streptomyces avermitilis MA-4680 | 5 | 3 |
| Genes | Function | ||||
|---|---|---|---|---|---|
| CRON 1. | |||||
| pnp |
*
Streptomyces scabiei 87.22 Site: position = -39 score = 6.35928 sequence = CATCTACGCGCGTAGGCC Gene: SCAB_34681: Purine nucleoside phosphorylase (EC 2.4.2.1) |
*
Streptomyces griseus subsp. griseus NBRC 13350 Site: position = -40 score = 6.34522 sequence = CATCTACGCGCGTAGGGA Gene: SGR_2626: Purine nucleoside phosphorylase (EC 2.4.2.1) |
*
Streptomyces coelicolor A3(2) Site: position = -39 score = 6.08374 sequence = CATCTACGCGCGTAGCCG Gene: SCO4917: Purine nucleoside phosphorylase (EC 2.4.2.1) |
*
Streptomyces avermitilis MA-4680 Site: position = -40 score = 6.35928 sequence = CATCTACGCGCGTAGGCC Gene: SAV_3342: Purine nucleoside phosphorylase (EC 2.4.2.1) |
Purine nucleoside phosphorylase (EC 2.4.2.1) |
| CRON 2. | |||||
| deoC |
*
Streptomyces scabiei 87.22 Site: position = -28 score = 6.49932 sequence = CTGCTACGCGCGTAGATA Gene: SCAB_34741: Deoxyribose-phosphate aldolase (EC 4.1.2.4) |
*
Streptomyces griseus subsp. griseus NBRC 13350 Site: position = -34 score = 6.17647 sequence = TCGCTACGCGCGTAGATA Gene: SGR_2629: Deoxyribose-phosphate aldolase (EC 4.1.2.4) |
*
Streptomyces coelicolor A3(2) Site: position = -34 score = 6.49932 sequence = CCGCTACGCGCGTAGATA Gene: SCO4914: Deoxyribose-phosphate aldolase (EC 4.1.2.4) |
*
Streptomyces avermitilis MA-4680 Site: position = -34 score = 6.49932 sequence = CTGCTACGCGCGTAGATA Gene: SAV_3346: Deoxyribose-phosphate aldolase (EC 4.1.2.4) |
Deoxyribose-phosphate aldolase (EC 4.1.2.4) |
| aldH1 |
Gene: SCAB_34751: Aldehyde dehydrogenase (EC 1.2.1.3) |
Gene: SGR_2630: Aldehyde dehydrogenase (EC 1.2.1.3) |
Gene: SCO4913: Aldehyde dehydrogenase (EC 1.2.1.3) |
Gene: SAV_3347: Aldehyde dehydrogenase (EC 1.2.1.3) |
Aldehyde dehydrogenase (EC 1.2.1.3) |
| aldH2 |
Gene: SCAB_34761: Aldehyde dehydrogenase (EC 1.2.1.3) |
Gene: SGR_2631: Aldehyde dehydrogenase (EC 1.2.1.3) |
Gene: SCO4912: Aldehyde dehydrogenase (EC 1.2.1.3) |
Gene: SAV_3348: Aldehyde dehydrogenase (EC 1.2.1.3) |
Aldehyde dehydrogenase (EC 1.2.1.3) |
| CRON 3. | |||||
| guaT |
*
Streptomyces scabiei 87.22 Site: position = -124 score = 4.75299 sequence = GGTCTACGCGCGGAGATG Gene: SCAB_50961: Guanine-hypoxanthine permease |
*
Streptomyces griseus subsp. griseus NBRC 13350 Site: position = -147 score = 5.01447 sequence = GGTCTACGCGCGGAGATA Gene: SGR_3165: Guanine-hypoxanthine permease |
*
Streptomyces coelicolor A3(2) Site: position = -140 score = 5.01447 sequence = GGTCTACGCGCGGAGATA Gene: SCO4334: Guanine-hypoxanthine permease |
*
Streptomyces avermitilis MA-4680 Site: position = -195 score = 4.75299 sequence = GGTCTACGCGCGGAGATG Gene: SAV_3897: Guanine-hypoxanthine permease |
Guanine-hypoxanthine permease |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |