Regulog GluR - Caulobacterales
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | |
| Biological process: | Carbohydrate metabolism |
| Effector: | Glucose |
| Phylum: | Proteobacteria/Alpha |
| Visualization: | |
|
Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Caulobacterales
- By TF family - LacI
- By effector - Glucose
- By pathway - Carbohydrate metabolism
| Genome | Genes | Operons |
|---|---|---|
| Caulobacter crescentus CB15 | 14 | 6 |
| Caulobacter segnis ATCC 21756 | 14 | 6 |
| Caulobacter sp. K31 | 11 | 5 |
| Phenylobacterium zucineum HLK1 |
| Genes | Function | ||||
|---|---|---|---|---|---|
| CRON 1. | |||||
| pykA |
*
Caulobacter crescentus CB15 Site: position = -216 score = 5.11845 sequence = TAACGTCAACGTTGTCAGGT Gene: CC2051: Pyruvate kinase (EC 2.7.1.40) |
*
Caulobacter segnis ATCC 21756 Site: position = -219 score = 4.63615 sequence = TTACGTCAACGTTTTCAGGC Gene: Cseg_1380: Pyruvate kinase (EC 2.7.1.40) |
*
Caulobacter sp. K31 Site: position = -119 score = 5.73925 sequence = GCTAGACAACGTTGTCAGGC Gene: Caul_1443: Pyruvate kinase (EC 2.7.1.40) |
|
Pyruvate kinase (EC 2.7.1.40) |
| CRON 2. | |||||
| sucC |
*
Caulobacter crescentus CB15 Site: position = -259 score = 5.90396 sequence = TTATGACAACGTTGCCATTG Gene: CC0337: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) |
*
Caulobacter segnis ATCC 21756 Site: position = -224 score = 4.42551 sequence = GATGGAAAGCGTTGTCATCG Gene: Cseg_3807: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) |
*
Caulobacter sp. K31 Site: position = -245 score = 6.03245 sequence = CCATGACAAGGCTGTCATTC Gene: Caul_0229: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) |
Gene: PHZ_c0158: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) |
Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) |
| sucD |
Gene: CC0338: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) |
Gene: Cseg_3806: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) |
Gene: Caul_0230: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) |
Gene: PHZ_c0159: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) |
Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) |
| sucA |
Gene: CC_0339: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) |
Gene: Cseg_3805: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) |
Gene: Caul_0231: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) |
Gene: PHZ_c0160: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) |
2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) |
| sucB |
Gene: CC0340: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) |
Gene: Cseg_3804: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) |
Gene: Caul_0232: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) |
Gene: PHZ_c0161: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) |
Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) |
| CRON 3. | |||||
| ppdK |
*
Caulobacter crescentus CB15 Site: position = -198 score = 5.93332 sequence = GCCGGACAACGTTGTCATTG Gene: CC1471: Pyruvate,phosphate dikinase (EC 2.7.9.1) |
*
Caulobacter segnis ATCC 21756 Site: position = -207 score = 5.61355 sequence = TTTGGACAACGTTGTCATTG Gene: Cseg_1949: Pyruvate,phosphate dikinase (EC 2.7.9.1) |
*
Caulobacter sp. K31 Site: position = -208 score = 5.99069 sequence = CCGAGACAACGTTGTCATTG Gene: Caul_2179: Pyruvate,phosphate dikinase (EC 2.7.9.1) |
Gene: PHZ_c1366: Pyruvate,phosphate dikinase (EC 2.7.9.1) |
Pyruvate,phosphate dikinase (EC 2.7.9.1) |
| CRON 4. | |||||
| gluR |
*
Caulobacter crescentus CB15 Site: position = -67 score = 6.29473 sequence = CCATGACAGCCTTGTCATGG Gene: CC2053: Predicted transcriptional regulator for central carbohydrate metabolism, LacI family |
*
Caulobacter segnis ATCC 21756 Site: position = -66 score = 6.29473 sequence = CCATGACAGCCTTGTCATGG Gene: Cseg_1378: Predicted transcriptional regulator for central carbohydrate metabolism, LacI family |
*
Caulobacter sp. K31 Site: position = -68 score = 5.86817 sequence = CCTTGACAAGGCTGTCATGC Gene: Caul_1442: Predicted transcriptional regulator for central carbohydrate metabolism, LacI family |
|
Predicted transcriptional regulator for central carbohydrate metabolism, LacI family |
| CRON 5. | |||||
| zwf |
*
Caulobacter crescentus CB15 Site: position = -73 score = 6.49159 sequence = TCATGACAACGTTGTCATAG Gene: CC2057: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) |
*
Caulobacter segnis ATCC 21756 Site: position = -34 score = 6.49159 sequence = TCATGACAACGTTGTCATAG Gene: Cseg_1373: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) |
*
Caulobacter sp. K31 Site: position = -30 score = 6.49159 sequence = TCATGACAACGTTGTCATAG Gene: Caul_1438: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) |
Gene: PHZ_c3256: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) |
Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) |
| pgl |
Gene: CC2056: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type |
Gene: Cseg_1374: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type |
Gene: Caul_1439: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type |
Gene: PHZ_c3253: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type |
6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type |
| edd |
Gene: CC2055: Phosphogluconate dehydratase (EC 4.2.1.12) |
Gene: Cseg_1375: Phosphogluconate dehydratase (EC 4.2.1.12) |
Gene: Caul_1440: Phosphogluconate dehydratase (EC 4.2.1.12) |
Gene: PHZ_c3252: Phosphogluconate dehydratase (EC 4.2.1.12) |
Phosphogluconate dehydratase (EC 4.2.1.12) |
| glk |
Gene: CC2054: Glucokinase (EC 2.7.1.2) |
Gene: Cseg_1376: Glucokinase (EC 2.7.1.2) |
Gene: Caul_1441: Glucokinase (EC 2.7.1.2) |
2
Phenylobacterium zucineum HLK1 Gene: PHZ_p0117: Glucokinase (EC 2.7.1.2) Gene: PHZ_c3251: Glucokinase (EC 2.7.1.2) |
Glucokinase (EC 2.7.1.2) |
| CRON 6. | |||||
| gnl |
*
Caulobacter crescentus CB15 Site: position = -56 score = 5.05088 sequence = CGGTGACATCGCTGTCATGG Gene: CC1224: Gluconolactonase (EC 3.1.1.17) |
*
Caulobacter segnis ATCC 21756 Site: position = -117 score = 5.43666 sequence = CCGTGACATCGCTGTCATGA Gene: Cseg_2660: Gluconolactonase (EC 3.1.1.17) |
Gene: Caul_0625: Gluconolactonase (EC 3.1.1.17) |
|
Gluconolactonase (EC 3.1.1.17) |
| gfo |
Gene: CC1225: Glucose--fructose oxidoreductase precursor (EC 1.1.99.28) (GFOR) |
Gene: Cseg_2659: Glucose--fructose oxidoreductase precursor (EC 1.1.99.28) (GFOR) |
Gene: Caul_3785: Glucose--fructose oxidoreductase precursor (EC 1.1.99.28) (GFOR) |
|
Glucose--fructose oxidoreductase precursor (EC 1.1.99.28) (GFOR) |
| xylB |
Gene: CC1226: Endo-1,4-beta-xylanase (EC 3.2.1.8) |
Gene: Cseg_2658: Endo-1,4-beta-xylanase (EC 3.2.1.8) |
Gene: Caul_3784: Endo-1,4-beta-xylanase (EC 3.2.1.8) |
|
Endo-1,4-beta-xylanase (EC 3.2.1.8) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |