Regulog ZntR - Vibrionales
| Regulator type: | Transcription factor |
| Regulator family: | MerR |
| Regulation mode: | activator |
| Biological process: | Zinc resistance |
| Effector: | Zinc ion, (Zn2+) |
| Phylum: | Proteobacteria/Gamma |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Vibrionales
- By trascription factor - ZntR
- By TF family - MerR
- By effector - Zinc ion, (Zn2+)
- By pathway - Zinc resistance
| Genome | Genes | Operons |
|---|---|---|
| Vibrio cholerae O1 biovar eltor str. N16961 | 1 | 1 |
| Vibrio vulnificus CMCP6 | 1 | 1 |
| Vibrio harveyi ATCC BAA-1116 | 1 | 1 |
| Vibrio parahaemolyticus RIMD 2210633 | 1 | 1 |
| Vibrio shilonii AK1 | 1 | 1 |
| Vibrio splendidus LGP32 | 1 | 1 |
| Vibrio fischeri ES114 | 1 | 1 |
| Vibrio salmonicida LFI1238 | 1 | 1 |
| Vibrio angustum S14 | 1 | 1 |
| Photobacterium profundum SS9 | 1 | 1 |
| Genes | Function | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||
| zntA |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -59 score = 6.75655 sequence = ACCTTGAAGTTGACTCCAAGGT Gene: VC1033: Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5) |
*
Vibrio vulnificus CMCP6 Site: position = -59 score = 6.60071 sequence = ACCTTGGAGCTGACTCTAAGGT Gene: VV1_2063: Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -308 score = 6.65189 sequence = ACCTTGGAGTTAGCTCTAAGGT Gene: VIBHAR_01515: Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -71 score = 6.63807 sequence = ACCTTGGAGCTAGCTCCAAGGT Gene: VP0959: Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5) |
*
Vibrio shilonii AK1 Site: position = -59 score = 6.63807 sequence = ACCTTGGAGCTAGCTCCAAGGT Gene: VSAK1_03780: Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5) |
*
Vibrio splendidus LGP32 Site: position = -104 score = 6.41858 sequence = ACCTTGGAGTAGTCTCCAAGGT Gene: VS_2083: Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5) |
*
Vibrio fischeri ES114 Site: position = -77 score = 6.91674 sequence = ACCTTGGAGTTAACTCTAAGGT Gene: VF_1522: Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5) |
*
Vibrio salmonicida LFI1238 Site: position = -74 score = 6.6657 sequence = ACCTTAGAGTTAACTCTAAGGT Gene: VSAL_I2067: Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5) |
*
Vibrio angustum S14 Site: position = -65 score = 5.85864 sequence = ACCTTAGACATTACTCCAAGGT Gene: VAS14_05123: Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5) |
*
Photobacterium profundum SS9 Site: position = -89 score = 6.63731 sequence = ACCTTGGATTTAACTCCAAGGT Gene: PBPRA1220: Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5) |
Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |