Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog NmlR - Burkholderia

Properties
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: activator
Biological process: Carbonyl stress response
Effector: Diamide
Phylum: Proteobacteria/Beta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 8 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Burkholderia pseudomallei K96243 2 1
Burkholderia mallei ATCC 23344 1 1
Burkholderia sp. 383 3 2
Burkholderia cepacia AMMD 2 1
Burkholderia vietnamiensis G4 2 1
Burkholderia glumae BGR1
Burkholderia xenovorans LB400 2 1
Burkholderia phymatum STM815 2 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
nmlR
*
Burkholderia pseudomallei K96243

Site:
position = -37
score = 6.22622
sequence = CTTAGAGTGCACTCTAAG

Gene: BPSL1487: Carbonyl stress transcriptional regulator, MerR family
*
Burkholderia mallei ATCC 23344

Site:
position = -37
score = 6.22622
sequence = CTTAGAGTGCACTCTAAG

Gene: BMA1374: Carbonyl stress transcriptional regulator, MerR family
*
Burkholderia sp. 383

Site:
position = -37
score = 6.08609
sequence = CTTAGAGTGAACTCTAAC

Gene: Bcep18194_A5145: Carbonyl stress transcriptional regulator, MerR family
*
Burkholderia cepacia AMMD

Site:
position = -37
score = 6.08609
sequence = CTTAGAGTGAACTCTAAC

Gene: Bamb_1782: Carbonyl stress transcriptional regulator, MerR family
*
Burkholderia vietnamiensis G4

Site:
position = -37
score = 6.08609
sequence = CTTAGAGTGAACTCTAAC

Gene: Bcep1808_1771: Carbonyl stress transcriptional regulator, MerR family
 
Burkholderia glumae BGR1
*
Burkholderia xenovorans LB400

Site:
position = -37
score = 5.63207
sequence = CTTAGAGTGCACTCGAAG

Gene: Bxe_A2371: Carbonyl stress transcriptional regulator, MerR family
*
Burkholderia phymatum STM815

Site:
position = -37
score = 5.87244
sequence = CTTAGAGTTCACTCGAAG

Gene: Bphy_0943: Carbonyl stress transcriptional regulator, MerR family
Carbonyl stress transcriptional regulator, MerR family
pcaC
 
Burkholderia pseudomallei K96243

Gene: BPSL1488: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44)
 
Burkholderia mallei ATCC 23344

Gene: BMA1373: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44)
 
Burkholderia sp. 383

Gene: Bcep18194_A5144: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44)
 
Burkholderia cepacia AMMD

Gene: Bamb_1781: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44)
 
Burkholderia vietnamiensis G4

Gene: Bcep1808_1770: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44)
 
Burkholderia glumae BGR1
 
Burkholderia xenovorans LB400

Gene: Bxe_A2370: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44)
 
Burkholderia phymatum STM815

Gene: Bphy_0944: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44)
4-carboxymuconolactone decarboxylase (EC 4.1.1.44)
 
CRON 2.
PF00724
 
Burkholderia pseudomallei K96243
 
Burkholderia mallei ATCC 23344
*
Burkholderia sp. 383

Site:
position = -54
score = 5.89866
sequence = CTTAAAGTTGACTTTAAA

Gene: Bcep18194_B2709: NADH:flavin oxidoreductase
 
Burkholderia cepacia AMMD
 
Burkholderia vietnamiensis G4
 
Burkholderia glumae BGR1
 
Burkholderia xenovorans LB400
 
Burkholderia phymatum STM815
NADH:flavin oxidoreductase
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD
© 2009-2020 RegPrecise