Regulog GntR - Alteromonadales
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Gluconate utilization |
| Effector: | Gluconate |
| Phylum: | Proteobacteria/gamma |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Alteromonadales
- By trascription factor - GntR
- By TF family - LacI
- By effector - Gluconate
- By pathway - Gluconate utilization
| Genome | Genes | Operons |
|---|---|---|
| Pseudoalteromonas atlantica T6c | ||
| Alteromonas macleodii 'Deep ecotype' | ||
| Glaciecola sp. HTCC2999 | ||
| Colwellia psychrerythraea 34H | ||
| Alteromonadales bacterium TW-7 | ||
| Pseudoalteromonas haloplanktis TAC125 | 3 | 3 |
| Pseudoalteromonas tunicata D2 | ||
| Idiomarina baltica OS145 | ||
| Idiomarina loihiensis L2TR |
| Genes | Function | |||||||||
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| CRON 1. | ||||||||||
| gntU |
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Pseudoalteromonas haloplanktis TAC125 Site: position = -83 score = 6.57794 sequence = ACATGTTACGCGTAACTTAA Site: position = -97 score = 6.29242 sequence = TTAAGTTACTGGTAACATGT Gene: PSHAb0479: Low-affinity gluconate transporter |
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Low-affinity gluconate transporter |
| CRON 2. | ||||||||||
| gntR |
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Pseudoalteromonas haloplanktis TAC125 Site: position = -97 score = 6.54137 sequence = TTATGTTACGTGTAACATAA Gene: PSHAb0478: Gluconate utilization transcriptional regulator GntR, LacI family |
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Gluconate utilization transcriptional regulator GntR, LacI family |
| CRON 3. | ||||||||||
| gntK |
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Pseudoalteromonas haloplanktis TAC125 Site: position = -90 score = 6.57794 sequence = TTAAGTTACGCGTAACATGT Site: position = -76 score = 6.29242 sequence = ACATGTTACCAGTAACTTAA Gene: PSHAb0480: Thermoresistant gluconokinase (EC 2.7.1.12) |
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Thermoresistant gluconokinase (EC 2.7.1.12) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |