Statistics of regulated genes

Genome	Genes	Operons
Desulfohalobium retbaense DSM 5692
Desulfomicrobium baculatum DSM 4028
Desulfovibrio desulfuricans G20	4	3
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	1	1
Desulfovibrio magneticus RS-1	2	1
Desulfovibrio piger ATCC 29098	1	1
Desulfovibrio salexigens DSM 2638
Desulfovibrio vulgaris Hildenborough	3	2
Desulfovibrio vulgaris str. Miyazaki F	3	2
Lawsonia intracellularis PHE/MN1-00	3	2

Clusters of co-Regulated Orthologous operoNs (CRONs)

Genes											Function
CRON 1.
zraS	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_1016: Sensor protein of zinc sigma-54-dependent two-component system	* Desulfovibrio desulfuricans G20 Site: position = -32 score = 5.00962 sequence = TGTACAAATATTGAACA Site: position = -50 score = 4.98329 sequence = TGTATAAAAAATAGACG Site: position = -84 score = 5.29568 sequence = TGTATAAAAAACATACA Gene: Dde_0110: Sensor protein of zinc sigma-54-dependent two-component system	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_0186: Sensor protein of zinc sigma-54-dependent two-component system	* Desulfovibrio magneticus RS-1 Site: position = -19 score = 4.12461 sequence = TGTATAGAATGTATGCA Gene: DMR_19620: Sensor protein of zinc sigma-54-dependent two-component system	Desulfovibrio piger ATCC 29098 Gene: DESPIG_02785: Sensor protein of zinc sigma-54-dependent two-component system	Desulfovibrio salexigens DSM 2638	* Desulfovibrio vulgaris Hildenborough Site: position = -414 score = 4.77026 sequence = CGTATGAAAATGATACA Site: position = -382 score = 5.01274 sequence = TGTATAAAAAATATACT Site: position = -74 score = 5.02148 sequence = TGTATGAAAAATAGACA Gene: DVU3382: Sensor protein of zinc sigma-54-dependent two-component system	* Desulfovibrio vulgaris str. Miyazaki F Site: position = -78 score = 4.5705 sequence = CGTATGAAAATCGAACA Site: position = -110 score = 5.09704 sequence = TGTATAAAAACTATACG Gene: DvMF_2148: Sensor protein of zinc sigma-54-dependent two-component system	* Lawsonia intracellularis PHE/MN1-00 Site: position = -19 score = 5.49294 sequence = TGTATAAAAAATATACA Gene: LI1078: Sensor protein of zinc sigma-54-dependent two-component system	Sensor protein of zinc sigma-54-dependent two-component system
zraR	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_1017: two component, sigma54 specific, transcriptional regulator, Fis family	Desulfovibrio desulfuricans G20 Gene: Dde_0109: two component, sigma54 specific, transcriptional regulator, Fis family	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_0187: two component, sigma54 specific, transcriptional regulator, Fis family	Desulfovibrio magneticus RS-1 Gene: DMR_19630: two component, sigma54 specific, transcriptional regulator, Fis family	Desulfovibrio piger ATCC 29098 Gene: DESPIG_02784: two component, sigma54 specific, transcriptional regulator, Fis family	Desulfovibrio salexigens DSM 2638	Desulfovibrio vulgaris Hildenborough Gene: DVU3381: two component, sigma54 specific, transcriptional regulator, Fis family	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_2149: two component, sigma54 specific, transcriptional regulator, Fis family	Lawsonia intracellularis PHE/MN1-00 Gene: LI1079: two component, sigma54 specific, transcriptional regulator, Fis family	two component, sigma54 specific, transcriptional regulator, Fis family
CRON 2.
zraP	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028	*2 Desulfovibrio desulfuricans G20 Site: position = -169 score = 5.29568 sequence = TGTATGTTTTTTATACA Site: position = -221 score = 5.00962 sequence = TGTTCAATATTTGTACA Site: position = -203 score = 4.98329 sequence = CGTCTATTTTTTATACA Gene: Dde_0111: Zinc resistance-associated protein Site: position = -190 score = 4.82856 sequence = TGTATAAAAAAAAGACA Site: position = -136 score = 5.47467 sequence = TGTATAAAAATTGTACA Site: position = -172 score = 4.66812 sequence = TGTCTTGTTTTTATACA Gene: Dde_2819: Zinc resistance-associated protein	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio magneticus RS-1	* Desulfovibrio piger ATCC 29098 Site: position = -211 score = 4.2252 sequence = TGCATAAAAACTGGACA Site: position = -243 score = 4.685 sequence = TGTATAATTTTTGACCA Gene: DESPIG_02788: Zinc resistance-associated protein	Desulfovibrio salexigens DSM 2638	* Desulfovibrio vulgaris Hildenborough Site: position = -226 score = 5.01274 sequence = AGTATATTTTTTATACA Site: position = -194 score = 4.77026 sequence = TGTATCATTTTCATACG Gene: DVU3384: Zinc resistance-associated protein	* Desulfovibrio vulgaris str. Miyazaki F Site: position = -242 score = 5.09704 sequence = CGTATAGTTTTTATACA Site: position = -274 score = 4.5705 sequence = TGTTCGATTTTCATACG Gene: DvMF_2147: Zinc resistance-associated protein	Lawsonia intracellularis PHE/MN1-00	Zinc resistance-associated protein
CRON 3.
LI1080	Desulfohalobium retbaense DSM 5692 Gene: Dret_0248: hypothetical protein	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_0283: hypothetical protein	Desulfovibrio desulfuricans G20 Gene: Dde_1143: hypothetical protein	* Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -228 score = 4.12657 sequence = TGTTTTATTAGTAGACA Gene: Ddes_1704: hypothetical protein	Desulfovibrio magneticus RS-1 Gene: DMR_39630: hypothetical protein	Desulfovibrio piger ATCC 29098 Gene: DESPIG_01431: hypothetical protein	Desulfovibrio salexigens DSM 2638 Gene: Desal_1471: hypothetical protein	Desulfovibrio vulgaris Hildenborough Gene: DVU0772: hypothetical protein	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_2834: hypothetical protein	* Lawsonia intracellularis PHE/MN1-00 Site: position = 13 score = 4.94622 sequence = TGTATGAGTTTTATACA Gene: LI1080: hypothetical protein	hypothetical protein

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