Regulog DVU2394 - Desulfovibrionales

Properties
Regulator type:	Transcription factor
Regulator family:	Fis
Regulation mode:
Biological process:	Energy metabolism
Effector:
Phylum:	Proteobacteria/delta
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 15 sites [see more]

Member of regulog collections

By taxonomy - Desulfovibrionales
By TF family - Fis
By pathway - Energy metabolism

Statistics of regulated genes
Genome	Genes	Operons
Desulfohalobium retbaense DSM 5692	9	1
Desulfomicrobium baculatum DSM 4028	12	3
Desulfovibrio desulfuricans G20	8	1
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
Desulfovibrio magneticus RS-1	11	2
Desulfovibrio piger ATCC 29098
Desulfovibrio salexigens DSM 2638	1	1
Desulfovibrio vulgaris Hildenborough	1	1
Desulfovibrio vulgaris str. Miyazaki F	1	1
Lawsonia intracellularis PHE/MN1-00

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes											Function

CRON 1.
adh	* Desulfohalobium retbaense DSM 5692 Site: position = -296 score = 4.53251 sequence = TGTATCATTTTTTCCCA Site: position = -264 score = 4.75036 sequence = CGTGTCATTTTGCTACA Gene: Dret_0199: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)	* Desulfomicrobium baculatum DSM 4028 Site: position = -230 score = 4.72583 sequence = AGGATCAAAGTGATACA Site: position = -264 score = 5.27077 sequence = TGAGTCATTTTGACTCA Gene: Dbac_3326: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)	* Desulfovibrio desulfuricans G20 Site: position = -258 score = 4.86032 sequence = TGTATCAGAATGAAACA Site: position = -200 score = 4.62339 sequence = GGGGTCAAATGGACACA Gene: Dde_3523: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio magneticus RS-1	Desulfovibrio piger ATCC 29098	* Desulfovibrio salexigens DSM 2638 Site: position = -264 score = 5.32506 sequence = TGGTTCATATTGACACA Gene: Desal_0284: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)	* Desulfovibrio vulgaris Hildenborough Site: position = -312 score = 4.90552 sequence = TGTGGCATTTCGACCCA Gene: DVU2405: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)	* Desulfovibrio vulgaris str. Miyazaki F Site: position = -311 score = 4.75673 sequence = TGTAGCATTTCGACCCA Gene: DvMF_0321: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)	Lawsonia intracellularis PHE/MN1-00	Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
hdrC	2 Desulfohalobium retbaense DSM 5692 Gene: Dret_0198: CoB--CoM heterodisulfide reductase subunit C (EC 1.8.98.1) Gene: Dret_2317: CoB--CoM heterodisulfide reductase subunit C (EC 1.8.98.1)	* Desulfomicrobium baculatum DSM 4028 Site: position = -84 score = 4.79121 sequence = TGTATCAATTTGGATCA Site: position = -50 score = 4.34852 sequence = TGTGTCAAAAAGGTTCA Gene: Dbac_0848: CoB--CoM heterodisulfide reductase subunit C (EC 1.8.98.1)	2 Desulfovibrio desulfuricans G20 Gene: Dde_3524: CoB--CoM heterodisulfide reductase subunit C (EC 1.8.98.1) Gene: Dde_1207: CoB--CoM heterodisulfide reductase subunit C (EC 1.8.98.1)	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_2098: CoB--CoM heterodisulfide reductase subunit C (EC 1.8.98.1)	* Desulfovibrio magneticus RS-1 Site: position = -233 score = 4.97167 sequence = TGTACCAAAATGGCACA Gene: DMR_01900: CoB--CoM heterodisulfide reductase subunit C (EC 1.8.98.1)	Desulfovibrio piger ATCC 29098 Gene: DESPIG_02729: CoB--CoM heterodisulfide reductase subunit C (EC 1.8.98.1)	Desulfovibrio salexigens DSM 2638 Gene: Desal_0602: CoB--CoM heterodisulfide reductase subunit C (EC 1.8.98.1)	Desulfovibrio vulgaris Hildenborough Gene: DVU2404: CoB--CoM heterodisulfide reductase subunit C (EC 1.8.98.1)	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_0322: CoB--CoM heterodisulfide reductase subunit C (EC 1.8.98.1)	Lawsonia intracellularis PHE/MN1-00	CoB--CoM heterodisulfide reductase subunit C (EC 1.8.98.1)
hdrB	2 Desulfohalobium retbaense DSM 5692 Gene: Dret_0197: CoB--CoM heterodisulfide reductase subunit B (EC 1.8.98.1) Gene: Dret_2316: CoB--CoM heterodisulfide reductase subunit B (EC 1.8.98.1)	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_0849: CoB--CoM heterodisulfide reductase subunit B (EC 1.8.98.1)	2 Desulfovibrio desulfuricans G20 Gene: Dde_3525: CoB--CoM heterodisulfide reductase subunit B (EC 1.8.98.1) Gene: Dde_1208: CoB--CoM heterodisulfide reductase subunit B (EC 1.8.98.1)	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_2099: CoB--CoM heterodisulfide reductase subunit B (EC 1.8.98.1)	Desulfovibrio magneticus RS-1 Gene: DMR_01910: CoB--CoM heterodisulfide reductase subunit B (EC 1.8.98.1)	Desulfovibrio piger ATCC 29098 Gene: DESPIG_02730: CoB--CoM heterodisulfide reductase subunit B (EC 1.8.98.1)	Desulfovibrio salexigens DSM 2638 Gene: Desal_0601: CoB--CoM heterodisulfide reductase subunit B (EC 1.8.98.1)	Desulfovibrio vulgaris Hildenborough Gene: DVU2403: CoB--CoM heterodisulfide reductase subunit B (EC 1.8.98.1)	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_0323: CoB--CoM heterodisulfide reductase subunit B (EC 1.8.98.1)	Lawsonia intracellularis PHE/MN1-00	CoB--CoM heterodisulfide reductase subunit B (EC 1.8.98.1)
hdrA	2 Desulfohalobium retbaense DSM 5692 Gene: Dret_0196: CoB--CoM heterodisulfide reductase subunit A (EC 1.8.98.1) Gene: Dret_2315: CoB--CoM heterodisulfide reductase subunit A (EC 1.8.98.1)	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_0850: CoB--CoM heterodisulfide reductase subunit A (EC 1.8.98.1)	2 Desulfovibrio desulfuricans G20 Gene: Dde_3526: CoB--CoM heterodisulfide reductase subunit A (EC 1.8.98.1) Gene: Dde_1209: CoB--CoM heterodisulfide reductase subunit A (EC 1.8.98.1)	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_2100: CoB--CoM heterodisulfide reductase subunit A (EC 1.8.98.1)	Desulfovibrio magneticus RS-1 Gene: DMR_01920: CoB--CoM heterodisulfide reductase subunit A (EC 1.8.98.1)	Desulfovibrio piger ATCC 29098 Gene: DESPIG_02731: CoB--CoM heterodisulfide reductase subunit A (EC 1.8.98.1)	Desulfovibrio salexigens DSM 2638 Gene: Desal_0600: CoB--CoM heterodisulfide reductase subunit A (EC 1.8.98.1)	Desulfovibrio vulgaris Hildenborough Gene: DVU2402: CoB--CoM heterodisulfide reductase subunit A (EC 1.8.98.1)	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_0324: CoB--CoM heterodisulfide reductase subunit A (EC 1.8.98.1)	Lawsonia intracellularis PHE/MN1-00	CoB--CoM heterodisulfide reductase subunit A (EC 1.8.98.1)
hdrD	2 Desulfohalobium retbaense DSM 5692 Gene: Dret_0195: CoB--CoM heterodisulfide reductase subunit D (EC 1.8.98.1) Gene: Dret_2314: CoB--CoM heterodisulfide reductase subunit D (EC 1.8.98.1)	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_0851: CoB--CoM heterodisulfide reductase subunit D (EC 1.8.98.1)	2 Desulfovibrio desulfuricans G20 Gene: Dde_1210: CoB--CoM heterodisulfide reductase subunit D (EC 1.8.98.1) Gene: Dde_3527: CoB--CoM heterodisulfide reductase subunit D (EC 1.8.98.1)	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio magneticus RS-1 Gene: DMR_01930: CoB--CoM heterodisulfide reductase subunit D (EC 1.8.98.1)	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638 Gene: Desal_0599: CoB--CoM heterodisulfide reductase subunit D (EC 1.8.98.1)	Desulfovibrio vulgaris Hildenborough	Desulfovibrio vulgaris str. Miyazaki F	Lawsonia intracellularis PHE/MN1-00	CoB--CoM heterodisulfide reductase subunit D (EC 1.8.98.1)
DVU2401	2 Desulfohalobium retbaense DSM 5692 Gene: Dret_0194: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein Gene: Dret_2313: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_0852: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein	2 Desulfovibrio desulfuricans G20 Gene: Dde_1211: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein Gene: Dde_3528: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_2101: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein	Desulfovibrio magneticus RS-1 Gene: DMR_01940: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein	Desulfovibrio piger ATCC 29098 Gene: DESPIG_02732: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein	Desulfovibrio salexigens DSM 2638 Gene: Desal_0598: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein	Desulfovibrio vulgaris Hildenborough Gene: DVU2401: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_0325: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein	Lawsonia intracellularis PHE/MN1-00	coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
DVU2400	2 Desulfohalobium retbaense DSM 5692 Gene: Dret_0193: heterodisulfide reductase, iron-sulfur binding subunit, putative Gene: Dret_2312: heterodisulfide reductase, iron-sulfur binding subunit, putative	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_0853: heterodisulfide reductase, iron-sulfur binding subunit, putative	2 Desulfovibrio desulfuricans G20 Gene: Dde_1212: heterodisulfide reductase, iron-sulfur binding subunit, putative Gene: Dde_3529: heterodisulfide reductase, iron-sulfur binding subunit, putative	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_2102: heterodisulfide reductase, iron-sulfur binding subunit, putative	Desulfovibrio magneticus RS-1 Gene: DMR_01950: heterodisulfide reductase, iron-sulfur binding subunit, putative	Desulfovibrio piger ATCC 29098 Gene: DESPIG_02733: heterodisulfide reductase, iron-sulfur binding subunit, putative	Desulfovibrio salexigens DSM 2638 Gene: Desal_0597: heterodisulfide reductase, iron-sulfur binding subunit, putative	Desulfovibrio vulgaris Hildenborough Gene: DVU2400: heterodisulfide reductase, iron-sulfur binding subunit, putative	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_0326: heterodisulfide reductase, iron-sulfur binding subunit, putative	Lawsonia intracellularis PHE/MN1-00	heterodisulfide reductase, iron-sulfur binding subunit, putative
DVU2399	2 Desulfohalobium retbaense DSM 5692 Gene: Dret_2311: oxidoreductase FAD/NAD(P)-binding domain protein Gene: Dret_0192: oxidoreductase FAD/NAD(P)-binding domain protein	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_0854: oxidoreductase FAD/NAD(P)-binding domain protein	2 Desulfovibrio desulfuricans G20 Gene: Dde_1213: oxidoreductase FAD/NAD(P)-binding domain protein Gene: Dde_3530: oxidoreductase FAD/NAD(P)-binding domain protein	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_2103: oxidoreductase FAD/NAD(P)-binding domain protein	Desulfovibrio magneticus RS-1 Gene: DMR_01960: oxidoreductase FAD/NAD(P)-binding domain protein	Desulfovibrio piger ATCC 29098 Gene: DESPIG_02734: oxidoreductase FAD/NAD(P)-binding domain protein	Desulfovibrio salexigens DSM 2638 Gene: Desal_0596: oxidoreductase FAD/NAD(P)-binding domain protein	Desulfovibrio vulgaris Hildenborough Gene: DVU2399: oxidoreductase FAD/NAD(P)-binding domain protein	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_0327: oxidoreductase FAD/NAD(P)-binding domain protein	Lawsonia intracellularis PHE/MN1-00	oxidoreductase FAD/NAD(P)-binding domain protein
Dbac_0855	2 Desulfohalobium retbaense DSM 5692 Gene: Dret_0191: Rubrerythrin Gene: Dret_2310: Rubrerythrin	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_0855: Rubrerythrin	Desulfovibrio desulfuricans G20 Gene: Dde_1214: Rubrerythrin	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio magneticus RS-1 Gene: DMR_01970: Rubrerythrin	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638 Gene: Desal_2939: Rubrerythrin	Desulfovibrio vulgaris Hildenborough Gene: DVU2398: Rubrerythrin	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_0328: Rubrerythrin	Lawsonia intracellularis PHE/MN1-00	Rubrerythrin

CRON 2.
adh	Desulfohalobium retbaense DSM 5692 Gene: Dret_0202: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)	* Desulfomicrobium baculatum DSM 4028 Site: position = -282 score = 4.72583 sequence = TGTATCACTTTGATCCT Site: position = -248 score = 5.27077 sequence = TGAGTCAAAATGACTCA Gene: Dbac_3325: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)	Desulfovibrio desulfuricans G20 Gene: Dde_3534: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	* Desulfovibrio magneticus RS-1 Site: position = 10 score = 5.07944 sequence = TGGGTCAAAATGCTCCA Gene: DMR_02380: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638 Gene: Desal_0289: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)	Desulfovibrio vulgaris Hildenborough Gene: DVU2396: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_0330: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)	Lawsonia intracellularis PHE/MN1-00	Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
DMR_02390	Desulfohalobium retbaense DSM 5692 Gene: Dret_0201: PAS/PAC sensor signal transduction histidine kinase	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_3324: PAS/PAC sensor signal transduction histidine kinase	Desulfovibrio desulfuricans G20 Gene: Dde_3535: PAS/PAC sensor signal transduction histidine kinase	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio magneticus RS-1 Gene: DMR_02390: PAS/PAC sensor signal transduction histidine kinase	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638 Gene: Desal_0288: PAS/PAC sensor signal transduction histidine kinase	Desulfovibrio vulgaris Hildenborough Gene: DVU2395: PAS/PAC sensor signal transduction histidine kinase	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_0331: PAS/PAC sensor signal transduction histidine kinase	Lawsonia intracellularis PHE/MN1-00	PAS/PAC sensor signal transduction histidine kinase
DMR_02400	Desulfohalobium retbaense DSM 5692 Gene: Dret_0200: two component, sigma54 specific, transcriptional regulator, Fis family	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_3323: two component, sigma54 specific, transcriptional regulator, Fis family	Desulfovibrio desulfuricans G20 Gene: Dde_3536: two component, sigma54 specific, transcriptional regulator, Fis family	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio magneticus RS-1 Gene: DMR_02400: two component, sigma54 specific, transcriptional regulator, Fis family	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638 Gene: Desal_0287: two component, sigma54 specific, transcriptional regulator, Fis family	Desulfovibrio vulgaris Hildenborough Gene: DVU2394: two component, sigma54 specific, transcriptional regulator, Fis family	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_0332: two component, sigma54 specific, transcriptional regulator, Fis family	Lawsonia intracellularis PHE/MN1-00	two component, sigma54 specific, transcriptional regulator, Fis family

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog DVU2394 - Desulfovibrionales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --