Regulog DVU1419 - Desulfovibrionales
| Regulator type: | Transcription factor |
| Regulator family: | Fis |
| Regulation mode: | |
| Biological process: | |
| Effector: | |
| Phylum: | Proteobacteria/delta |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Desulfovibrionales
- By TF family - Fis
| Genome | Genes | Operons |
|---|---|---|
| Desulfohalobium retbaense DSM 5692 | 3 | 1 |
| Desulfomicrobium baculatum DSM 4028 | 3 | 1 |
| Desulfovibrio desulfuricans G20 | 2 | 1 |
| Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 | ||
| Desulfovibrio magneticus RS-1 | ||
| Desulfovibrio piger ATCC 29098 | ||
| Desulfovibrio salexigens DSM 2638 | 5 | 2 |
| Desulfovibrio vulgaris Hildenborough | 3 | 2 |
| Desulfovibrio vulgaris str. Miyazaki F | 3 | 1 |
| Lawsonia intracellularis PHE/MN1-00 |
| Genes | Function | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||
| DVU0036 |
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Desulfohalobium retbaense DSM 5692 Site: position = -153 score = 5.71817 sequence = TGTGCAGCGCATTGCACA Gene: Dret_2390: zinc resistance-associated protein |
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Desulfomicrobium baculatum DSM 4028 Site: position = -190 score = 5.27868 sequence = AATGCAGCATTTTGCACA Site: position = -161 score = 5.30225 sequence = TGTGCAACAGGCGGTACA Gene: Dbac_2711: zinc resistance-associated protein |
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*2
Desulfovibrio salexigens DSM 2638 Site: position = -150 score = 4.73217 sequence = TGCGCAATTCATTGCATA Gene: Desal_0681: zinc resistance-associated protein Site: position = -158 score = 6.23813 sequence = TGTGCAATATGATGCACA Gene: Desal_0680: zinc resistance-associated protein |
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Desulfovibrio vulgaris Hildenborough Site: position = -149 score = 5.29532 sequence = TGTGCATCACCATGCACA Gene: DVU0036: zinc resistance-associated protein |
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zinc resistance-associated protein |
| Desal_0679 |
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Gene: DESPIG_00403: hypothetical protein |
Gene: Desal_0679: hypothetical protein |
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hypothetical protein |
| DVU1418 |
Gene: Dret_2391: PAS/PAC sensor signal transduction histidine kinase |
Gene: Dbac_2712: PAS/PAC sensor signal transduction histidine kinase |
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Desulfovibrio desulfuricans G20 Site: position = -141 score = 5.63929 sequence = TGTGCAAGATATTGCGCA Gene: Dde_1684: PAS/PAC sensor signal transduction histidine kinase |
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Gene: Desal_0678: PAS/PAC sensor signal transduction histidine kinase |
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Desulfovibrio vulgaris Hildenborough Site: position = -208 score = 5.40013 sequence = TGTGCATCTTATTGCACG Site: position = -179 score = 5.3199 sequence = TGTGCCATCGTTTGCACA Gene: DVU1418: PAS/PAC sensor signal transduction histidine kinase |
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Desulfovibrio vulgaris str. Miyazaki F Site: position = -177 score = 5.72123 sequence = TGTGCAATTTTGTGCACA Site: position = -47 score = 4.79557 sequence = TGTGCAGCAGGGTGCGGA Gene: DvMF_0213: PAS/PAC sensor signal transduction histidine kinase |
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PAS/PAC sensor signal transduction histidine kinase |
| DVU1419 |
Gene: Dret_2392: two component, sigma54 specific, transcriptional regulator, Fis family |
Gene: Dbac_2713: two component, sigma54 specific, transcriptional regulator, Fis family |
Gene: Dde_1685: two component, sigma54 specific, transcriptional regulator, Fis family |
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Gene: Desal_0677: two component, sigma54 specific, transcriptional regulator, Fis family |
Gene: DVU1419: two component, sigma54 specific, transcriptional regulator, Fis family |
Gene: DvMF_0215: two component, sigma54 specific, transcriptional regulator, Fis family |
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two component, sigma54 specific, transcriptional regulator, Fis family |
| DvMF_0216 |
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2
Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_0216: hypothetical protein Gene: DvMF_1738: hypothetical protein |
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hypothetical protein |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |