Regulog DVU2894 - Desulfovibrionales

Properties
Regulator type:	Transcription factor
Regulator family:	Fis
Regulation mode:
Biological process:	Motility
Effector:
Phylum:	Proteobacteria/Delta
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 27 sites [see more]

Member of regulog collections

By taxonomy - Desulfovibrionales
By TF family - Fis
By pathway - Motility

Statistics of regulated genes
Genome	Genes	Operons
Desulfohalobium retbaense DSM 5692	11	1
Desulfomicrobium baculatum DSM 4028	3	2
Desulfovibrio desulfuricans G20	6	4
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	7	5
Desulfovibrio magneticus RS-1	3	2
Desulfovibrio piger ATCC 29098	2	2
Desulfovibrio salexigens DSM 2638	3	2
Desulfovibrio vulgaris Hildenborough	8	3
Desulfovibrio vulgaris str. Miyazaki F	3	2
Lawsonia intracellularis PHE/MN1-00	6	3

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes											Function

CRON 1.
DVU2894	Desulfohalobium retbaense DSM 5692 Gene: Dret_0568: sigma-54 dependent transcriptional regulator, Fis family	* Desulfomicrobium baculatum DSM 4028 Site: position = -68 score = 5.08765 sequence = CGTCATAATCTTGACA Gene: Dbac_3226: sigma-54 dependent transcriptional regulator, Fis family	* Desulfovibrio desulfuricans G20 Site: position = -78 score = 5.12515 sequence = CGTCATGTTTTTGACA Gene: Dde_2959: sigma-54 dependent transcriptional regulator, Fis family	* Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -46 score = 5.28289 sequence = CGTCAGTGTATTGACA Gene: Ddes_1305: sigma-54 dependent transcriptional regulator, Fis family	* Desulfovibrio magneticus RS-1 Site: position = -83 score = 5.35082 sequence = TGTCAGTAAATTGACA Gene: DMR_31690: sigma-54 dependent transcriptional regulator, Fis family	* Desulfovibrio piger ATCC 29098 Site: position = -46 score = 5.20827 sequence = TGTCAGTGTATTGACA Gene: DESPIG_00321: sigma-54 dependent transcriptional regulator, Fis family	* Desulfovibrio salexigens DSM 2638 Site: position = -116 score = 5.27449 sequence = CGTCATTTCATTGACA Gene: Desal_2984: sigma-54 dependent transcriptional regulator, Fis family	* Desulfovibrio vulgaris Hildenborough Site: position = -66 score = 5.2865 sequence = TGTCATGTAATTGACA Gene: DVU2894: sigma-54 dependent transcriptional regulator, Fis family	* Desulfovibrio vulgaris str. Miyazaki F Site: position = -352 score = 4.84543 sequence = TGTCAGCGAATTGACA Gene: DvMF_1324: sigma-54 dependent transcriptional regulator, Fis family	* Lawsonia intracellularis PHE/MN1-00 Site: position = -70 score = 4.87045 sequence = TGTCAGACTCTTGACA Gene: LI1092: sigma-54 dependent transcriptional regulator, Fis family	sigma-54 dependent transcriptional regulator, Fis family

CRON 2.
flaB3	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028	* Desulfovibrio desulfuricans G20 Site: position = -50 score = 4.89457 sequence = TGTCAAGTTGCTGACA Gene: Dde_1501: Flagellin protein FlaA	* Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -276 score = 4.12229 sequence = CGACAGCAATTTGACG Gene: Ddes_2282: Flagellin protein FlaA	Desulfovibrio magneticus RS-1	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638	Desulfovibrio vulgaris Hildenborough Gene: DVU2444: Flagellin protein FlaA	Desulfovibrio vulgaris str. Miyazaki F	Lawsonia intracellularis PHE/MN1-00	Flagellin protein FlaA

CRON 3.
motA	* Desulfohalobium retbaense DSM 5692 Site: position = -374 score = 5.00972 sequence = TGTCAATTTCCTGACT Gene: Dret_0578: MotA/TolQ/ExbB proton channel	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_2738: MotA/TolQ/ExbB proton channel	Desulfovibrio desulfuricans G20 Gene: Dde_3589: Flagellar motor rotation protein MotA	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio magneticus RS-1	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638 Gene: Desal_3811: MotA/TolQ/ExbB proton channel	Desulfovibrio vulgaris Hildenborough Gene: DVU0050: Flagellar motor rotation protein MotA	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_2209: Flagellar motor rotation protein MotA	Lawsonia intracellularis PHE/MN1-00	MotA/TolQ/ExbB proton channel
Dbac_2737	Desulfohalobium retbaense DSM 5692 Gene: Dret_0579: OmpA/MotB domain protein	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_2737: OmpA/MotB domain protein	Desulfovibrio desulfuricans G20 Gene: Dde_3588: Flagellar motor rotation protein MotB	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio magneticus RS-1	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638 Gene: Desal_3812: OmpA/MotB domain protein	Desulfovibrio vulgaris Hildenborough Gene: DVU0049: Flagellar motor rotation protein MotB	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_2210: Flagellar motor rotation protein MotB	Lawsonia intracellularis PHE/MN1-00	OmpA/MotB domain protein
fliL	Desulfohalobium retbaense DSM 5692 Gene: Dret_0580: flagellar basal body-associated protein FliL	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_2735: flagellar basal body-associated protein FliL	Desulfovibrio desulfuricans G20 Gene: Dde_3586: Flagellar biosynthesis protein FliL	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_0373: Flagellar biosynthesis protein FliL	3 Desulfovibrio magneticus RS-1 Gene: DMR_33940: putative flagellar FliL protein Gene: DMR_26920: putative flagellar FliL protein Gene: DMR_46170: flagellar FliL protein	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638 Gene: Desal_3814: flagellar basal body-associated protein FliL	* Desulfovibrio vulgaris Hildenborough Site: position = -381 score = 4.86428 sequence = CGTCATTGCCCTGACA Gene: DVU0047: Flagellar biosynthesis protein FliL	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_2212: Flagellar biosynthesis protein FliL	Lawsonia intracellularis PHE/MN1-00 Gene: LI0642: Flagellar biosynthesis protein FliL	flagellar basal body-associated protein FliL
fliM	Desulfohalobium retbaense DSM 5692 Gene: Dret_0581: flagellar motor switch protein FliM	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_2734: flagellar motor switch protein FliM	Desulfovibrio desulfuricans G20 Gene: Dde_2708: Flagellar motor switch protein FliM	* Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -475 score = 5.19976 sequence = CGTCAGGCACTTGACG Gene: Ddes_1836: Flagellar motor switch protein FliM	Desulfovibrio magneticus RS-1 Gene: DMR_22580: flagellar motor switch protein FliM	* Desulfovibrio piger ATCC 29098 Site: position = -402 score = 5.12735 sequence = CGTCAGTTATCTGACG Gene: DESPIG_02462: hypothetical protein	Desulfovibrio salexigens DSM 2638 Gene: Desal_3583: flagellar motor switch protein FliM	Desulfovibrio vulgaris Hildenborough Gene: DVU0910: Flagellar motor switch protein FliM	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_1396: Flagellar motor switch protein FliM	Lawsonia intracellularis PHE/MN1-00 Gene: LI0027: Flagellar motor switch protein FliM	flagellar motor switch protein FliM
fliN	Desulfohalobium retbaense DSM 5692 Gene: Dret_0582: flagellar motor switch protein FliN	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_2733: flagellar motor switch protein FliN	Desulfovibrio desulfuricans G20 Gene: Dde_3585: Flagellar motor switch protein FliN	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_0375: Flagellar motor switch protein FliN	Desulfovibrio magneticus RS-1 Gene: DMR_46180: flagellar motor switch protein FliN	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638 Gene: Desal_3815: flagellar motor switch protein FliN	Desulfovibrio vulgaris Hildenborough Gene: DVU0046: Flagellar motor switch protein FliN	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_2213: Flagellar motor switch protein FliN	Lawsonia intracellularis PHE/MN1-00 Gene: LI0641: Flagellar motor switch protein FliN	flagellar motor switch protein FliN
Dret_0583	Desulfohalobium retbaense DSM 5692 Gene: Dret_0583: flagellar biosynthesis protein FliO	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_2732: flagellar biosynthesis protein FliO	Desulfovibrio desulfuricans G20 Gene: Dde_3584: Flagellar biosynthesis protein FliO	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_0376: Flagellar biosynthesis protein FliO	Desulfovibrio magneticus RS-1 Gene: DMR_46190: putative flagellar protein FliO	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638 Gene: Desal_3816: flagellar biosynthesis protein FliO	Desulfovibrio vulgaris Hildenborough Gene: DVU0045: Flagellar biosynthesis protein FliO	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_2214: Flagellar biosynthesis protein FliO	Lawsonia intracellularis PHE/MN1-00 Gene: LI0640: Flagellar biosynthesis protein FliO	flagellar biosynthesis protein FliO
fliP	Desulfohalobium retbaense DSM 5692 Gene: Dret_0584: flagellar biosynthetic protein FliP	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_2731: flagellar biosynthetic protein FliP	* Desulfovibrio desulfuricans G20 Site: position = -122 score = 4.64634 sequence = CATCAATCTCTTGACG Site: position = -25 score = 4.39324 sequence = TGTCACTCTGTTGACA Gene: Dde_3583: flagellar biosynthetic protein FliP	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_0377: Flagellar biosynthesis protein FliP	Desulfovibrio magneticus RS-1 Gene: DMR_46200: flagellar biosynthetic protein FliP	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638 Gene: Desal_3817: flagellar biosynthetic protein FliP	Desulfovibrio vulgaris Hildenborough Gene: DVU0044: Flagellar biosynthesis protein FliP	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_2215: Flagellar biosynthesis protein FliP	Lawsonia intracellularis PHE/MN1-00 Gene: LI0639: Flagellar biosynthesis protein FliP	flagellar biosynthetic protein FliP
fliQ	Desulfohalobium retbaense DSM 5692 Gene: Dret_0585: flagellar biosynthetic protein FliQ	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_2730: flagellar biosynthetic protein FliQ	Desulfovibrio desulfuricans G20 Gene: Dde_3582: flagellar biosynthetic protein FliQ	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_0378: Flagellar biosynthesis protein FliQ	Desulfovibrio magneticus RS-1 Gene: DMR_46210: flagellar biosynthetic protein FliQ	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638 Gene: Desal_3818: flagellar biosynthetic protein FliQ	Desulfovibrio vulgaris Hildenborough Gene: DVU0043: Flagellar biosynthesis protein FliQ	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_2216: Flagellar biosynthesis protein FliQ	Lawsonia intracellularis PHE/MN1-00	flagellar biosynthetic protein FliQ
fliR	Desulfohalobium retbaense DSM 5692 Gene: Dret_0586: flagellar biosynthetic protein FliR	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_3473: flagellar biosynthetic protein FliR	Desulfovibrio desulfuricans G20 Gene: Dde_0378: Flagellar biosynthesis protein FliR	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_0193: Flagellar biosynthesis protein FliR	Desulfovibrio magneticus RS-1 Gene: DMR_23860: flagellar biosynthetic protein FliR	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638 Gene: Desal_2592: flagellar biosynthetic protein FliR	Desulfovibrio vulgaris Hildenborough Gene: DVU3234: Flagellar biosynthesis protein FliR	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_2016: Flagellar biosynthesis protein FliR	Lawsonia intracellularis PHE/MN1-00 Gene: LI0532: Flagellar biosynthesis protein FliR	flagellar biosynthetic protein FliR
flhB	Desulfohalobium retbaense DSM 5692 Gene: Dret_0587: flagellar biosynthetic protein FlhB	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_3472: flagellar biosynthetic protein FlhB	Desulfovibrio desulfuricans G20 Gene: Dde_0379: Flagellar biosynthesis protein FlhB	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_0332: Flagellar biosynthesis protein FlhB	Desulfovibrio magneticus RS-1 Gene: DMR_23870: flagellar biosynthetic protein FlhB	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638 Gene: Desal_2593: type III secretion exporter	Desulfovibrio vulgaris Hildenborough Gene: DVU3233: Flagellar biosynthesis protein FlhB	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_2015: Flagellar biosynthesis protein FlhB	Lawsonia intracellularis PHE/MN1-00 Gene: LI0531: Flagellar biosynthesis protein FlhB	flagellar biosynthetic protein FlhB
flhA	Desulfohalobium retbaense DSM 5692 Gene: Dret_0588: flagellar biosynthesis protein FlhA	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_3471: flagellar biosynthesis protein FlhA	Desulfovibrio desulfuricans G20 Gene: Dde_0380: Flagellar biosynthesis protein FlhA	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_0331: Flagellar biosynthesis protein FlhA	Desulfovibrio magneticus RS-1 Gene: DMR_23880: flagellar biosynthesis protein FlhA	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638 Gene: Desal_2594: flagellar biosynthesis protein FlhA	Desulfovibrio vulgaris Hildenborough Gene: DVU3232: Flagellar biosynthesis protein FlhA	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_2014: Flagellar biosynthesis protein FlhA	Lawsonia intracellularis PHE/MN1-00 Gene: LI0530: Flagellar biosynthesis protein FlhA	flagellar biosynthesis protein FlhA
flgH	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_2407: flagellar L-ring protein	Desulfovibrio desulfuricans G20 Gene: Dde_3156: Flagellar L-ring protein FlgH	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_0394: Flagellar L-ring protein FlgH	Desulfovibrio magneticus RS-1 Gene: DMR_31540: flagellar L-ring protein	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638 Gene: Desal_1011: flagellar L-ring protein	Desulfovibrio vulgaris Hildenborough Gene: DVU0515: Flagellar L-ring protein FlgH	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_2520: Flagellar L-ring protein FlgH	* Lawsonia intracellularis PHE/MN1-00 Site: position = -425 score = 4.75201 sequence = CGTCAATATACTGGCA Gene: LI0743: Flagellar L-ring protein FlgH	flagellar L-ring protein
flgI	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_2406: flagellar P-ring protein	Desulfovibrio desulfuricans G20 Gene: Dde_3155: Flagellar P-ring protein FlgI	* Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -4 score = 4.76231 sequence = CGCCATGAAATTGACG Gene: Ddes_2004: Flagellar P-ring protein FlgI	Desulfovibrio magneticus RS-1 Gene: DMR_31530: flagellar P-ring protein precursor	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638 Gene: Desal_1012: flagellar P-ring protein	Desulfovibrio vulgaris Hildenborough Gene: DVU0516: Flagellar P-ring protein FlgI	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_2521: Flagellar P-ring protein FlgI	Lawsonia intracellularis PHE/MN1-00 Gene: LI0744: Flagellar P-ring protein FlgI	flagellar P-ring protein
flgJ	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_2405: hypothetical protein	Desulfovibrio desulfuricans G20	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_2003: hypothetical protein	Desulfovibrio magneticus RS-1	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638 Gene: Desal_1014: membrane protein, metalloendopeptidase-like protein	Desulfovibrio vulgaris Hildenborough	Desulfovibrio vulgaris str. Miyazaki F	Lawsonia intracellularis PHE/MN1-00 Gene: LI0745: Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-)	Flagellar protein FlgJ-like protein

CRON 4.
DVU0410	Desulfohalobium retbaense DSM 5692	* Desulfomicrobium baculatum DSM 4028 Site: position = -414 score = 5.342 sequence = CGTCAATTTCTTGACC Gene: Dbac_0691: hypothetical protein	* Desulfovibrio desulfuricans G20 Site: position = -478 score = 4.98219 sequence = AGTCAATTTCTTGACC Gene: Dde_0564: hypothetical protein	* Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -445 score = 4.84001 sequence = CGTCAGATGTTTGACA Gene: Ddes_0313: hypothetical protein	* Desulfovibrio magneticus RS-1 Site: position = -434 score = 5.55083 sequence = CGTCAATTCCTTGACG Gene: DMR_25590: hypothetical protein	Desulfovibrio piger ATCC 29098	* Desulfovibrio salexigens DSM 2638 Site: position = -433 score = 4.57002 sequence = CGTCGCTTTCTTGACG Gene: Desal_2827: hypothetical protein	* Desulfovibrio vulgaris Hildenborough Site: position = -557 score = 5.23694 sequence = CGTCAATTCCTTGACC Gene: DVU0410: hypothetical protein	* Desulfovibrio vulgaris str. Miyazaki F Site: position = -555 score = 5.13027 sequence = CGTCAGTTTCTTGACC Gene: DvMF_1546: hypothetical protein	* Lawsonia intracellularis PHE/MN1-00 Site: position = -436 score = 4.95166 sequence = CGTCAACTTATTGACT Gene: LI1017: hypothetical protein	hypothetical protein
DVU0409	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_0692: hypothetical protein	Desulfovibrio desulfuricans G20 Gene: Dde_0563: hypothetical protein	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_0314: hypothetical protein	Desulfovibrio magneticus RS-1 Gene: DMR_25580: hypothetical protein	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638 Gene: Desal_2826: hypothetical protein	Desulfovibrio vulgaris Hildenborough Gene: DVU0409: hypothetical protein	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_1545: hypothetical protein	Lawsonia intracellularis PHE/MN1-00 Gene: LI1016: hypothetical protein	hypothetical protein

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog DVU2894 - Desulfovibrionales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --