Regulog UxuR - Streptococcaceae

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Glucuronate utilization
Effector:	Glucuronate
Phylum:	Firmicutes
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 4 sites [see more]

Member of regulog collections

By taxonomy - Streptococcaceae
By TF family - GntR/Others
By effector - Glucuronate
By pathway - Glucuronate utilization

Statistics of regulated genes
Genome	Genes	Operons
Lactococcus lactis subsp. cremoris SK11	8	2
Lactococcus lactis subsp. lactis Il1403	8	2
Streptococcus agalactiae 2603V/R
Streptococcus dysgalactiae subsp. equisimilis GGS_124
Streptococcus equi subsp. zooepidemicus MGCS10565
Streptococcus gallolyticus UCN34
Streptococcus gordonii str. Challis substr. CH1
Streptococcus mitis B6
Streptococcus mutans UA159
Streptococcus pneumoniae TIGR4
Streptococcus pyogenes M1 GAS
Streptococcus sanguinis SK36
Streptococcus suis 05ZYH33
Streptococcus thermophilus CNRZ1066
Streptococcus uberis 0140J

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes																Function

CRON 1.
uxuB	* Lactococcus lactis subsp. cremoris SK11 Site: position = -36 score = 7.02942 sequence = AAACTGATATATCACTTT Gene: LACR_1746: D-mannonate oxidoreductase (EC 1.1.1.57)	* Lactococcus lactis subsp. lactis Il1403 Site: position = -39 score = 7.02942 sequence = AAACTGATATATCACTTT Gene: L0241: D-mannonate oxidoreductase (EC 1.1.1.57)	Streptococcus agalactiae 2603V/R	Streptococcus dysgalactiae subsp. equisimilis GGS_124	Streptococcus equi subsp. zooepidemicus MGCS10565	Streptococcus gallolyticus UCN34	Streptococcus gordonii str. Challis substr. CH1	Streptococcus mitis B6	Streptococcus mutans UA159	Streptococcus pneumoniae TIGR4	Streptococcus pyogenes M1 GAS	Streptococcus sanguinis SK36	Streptococcus suis 05ZYH33	Streptococcus thermophilus CNRZ1066	Streptococcus uberis 0140J	D-mannonate oxidoreductase (EC 1.1.1.57)
uxuA	Lactococcus lactis subsp. cremoris SK11 Gene: LACR_1745: Mannonate dehydratase (EC 4.2.1.8)	Lactococcus lactis subsp. lactis Il1403 Gene: L0020: Mannonate dehydratase (EC 4.2.1.8)	Streptococcus agalactiae 2603V/R	Streptococcus dysgalactiae subsp. equisimilis GGS_124	Streptococcus equi subsp. zooepidemicus MGCS10565	Streptococcus gallolyticus UCN34	Streptococcus gordonii str. Challis substr. CH1	Streptococcus mitis B6	Streptococcus mutans UA159	Streptococcus pneumoniae TIGR4	Streptococcus pyogenes M1 GAS	Streptococcus sanguinis SK36	Streptococcus suis 05ZYH33	Streptococcus thermophilus CNRZ1066	Streptococcus uberis 0140J	Mannonate dehydratase (EC 4.2.1.8)
uxuT	Lactococcus lactis subsp. cremoris SK11 Gene: LACR_1744: Predicted oligogalacturonide transporter	Lactococcus lactis subsp. lactis Il1403 Gene: L0023: Predicted oligogalacturonide transporter	Streptococcus agalactiae 2603V/R	Streptococcus dysgalactiae subsp. equisimilis GGS_124	Streptococcus equi subsp. zooepidemicus MGCS10565	Streptococcus gallolyticus UCN34	Streptococcus gordonii str. Challis substr. CH1	Streptococcus mitis B6	Streptococcus mutans UA159	Streptococcus pneumoniae TIGR4	Streptococcus pyogenes M1 GAS	Streptococcus sanguinis SK36	Streptococcus suis 05ZYH33	Streptococcus thermophilus CNRZ1066	Streptococcus uberis 0140J	Predicted oligogalacturonide transporter
yqhA	Lactococcus lactis subsp. cremoris SK11 Gene: LACR_1743: Predicted aldose epimerase	Lactococcus lactis subsp. lactis Il1403 Gene: L74167: Predicted aldose epimerase	Streptococcus agalactiae 2603V/R	Streptococcus dysgalactiae subsp. equisimilis GGS_124	Streptococcus equi subsp. zooepidemicus MGCS10565	Streptococcus gallolyticus UCN34	Streptococcus gordonii str. Challis substr. CH1	Streptococcus mitis B6	Streptococcus mutans UA159	Streptococcus pneumoniae TIGR4	Streptococcus pyogenes M1 GAS	Streptococcus sanguinis SK36	Streptococcus suis 05ZYH33	Streptococcus thermophilus CNRZ1066	Streptococcus uberis 0140J	Predicted aldose epimerase
uxaC	Lactococcus lactis subsp. cremoris SK11 Gene: LACR_1742: Uronate isomerase (EC 5.3.1.12)	Lactococcus lactis subsp. lactis Il1403 Gene: L0019: Uronate isomerase (EC 5.3.1.12)	Streptococcus agalactiae 2603V/R	Streptococcus dysgalactiae subsp. equisimilis GGS_124	Streptococcus equi subsp. zooepidemicus MGCS10565	Streptococcus gallolyticus UCN34	Streptococcus gordonii str. Challis substr. CH1	Streptococcus mitis B6	Streptococcus mutans UA159	Streptococcus pneumoniae TIGR4	Streptococcus pyogenes M1 GAS	Streptococcus sanguinis SK36	Streptococcus suis 05ZYH33	Streptococcus thermophilus CNRZ1066	Streptococcus uberis 0140J	Uronate isomerase (EC 5.3.1.12)
kdgK	Lactococcus lactis subsp. cremoris SK11 Gene: LACR_1741: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	Lactococcus lactis subsp. lactis Il1403 Gene: L0021: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	Streptococcus agalactiae 2603V/R	Streptococcus dysgalactiae subsp. equisimilis GGS_124	Streptococcus equi subsp. zooepidemicus MGCS10565	Streptococcus gallolyticus UCN34	Streptococcus gordonii str. Challis substr. CH1	Streptococcus mitis B6	Streptococcus mutans UA159	Streptococcus pneumoniae TIGR4	Streptococcus pyogenes M1 GAS	Streptococcus sanguinis SK36	Streptococcus suis 05ZYH33	Streptococcus thermophilus CNRZ1066	Streptococcus uberis 0140J Gene: SUB1602: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
kdgA	Lactococcus lactis subsp. cremoris SK11 Gene: LACR_1740: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)	Lactococcus lactis subsp. lactis Il1403 Gene: L0022: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)	Streptococcus agalactiae 2603V/R	Streptococcus dysgalactiae subsp. equisimilis GGS_124	Streptococcus equi subsp. zooepidemicus MGCS10565	Streptococcus gallolyticus UCN34	Streptococcus gordonii str. Challis substr. CH1	Streptococcus mitis B6	Streptococcus mutans UA159	Streptococcus pneumoniae TIGR4	Streptococcus pyogenes M1 GAS	Streptococcus sanguinis SK36	Streptococcus suis 05ZYH33	Streptococcus thermophilus CNRZ1066	Streptococcus uberis 0140J Gene: SUB1601: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)	2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)

CRON 2.
uxuR	* Lactococcus lactis subsp. cremoris SK11 Site: position = -365 score = 7.02942 sequence = AAAGTGATATATCAGTTT Gene: LACR_1747: Glucuronate utilization transcriptional regulator UxuR, GntR family	* Lactococcus lactis subsp. lactis Il1403 Site: position = -147 score = 7.02942 sequence = AAAGTGATATATCAGTTT Gene: L0240: Glucuronate utilization transcriptional regulator UxuR, GntR family	Streptococcus agalactiae 2603V/R	Streptococcus dysgalactiae subsp. equisimilis GGS_124	Streptococcus equi subsp. zooepidemicus MGCS10565	Streptococcus gallolyticus UCN34	Streptococcus gordonii str. Challis substr. CH1	Streptococcus mitis B6	Streptococcus mutans UA159	Streptococcus pneumoniae TIGR4	Streptococcus pyogenes M1 GAS	Streptococcus sanguinis SK36	Streptococcus suis 05ZYH33	Streptococcus thermophilus CNRZ1066	Streptococcus uberis 0140J	Glucuronate utilization transcriptional regulator UxuR, GntR family

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog UxuR - Streptococcaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --