Regulog mini-ykkC - Caulobacterales
| Regulator type: | RNA regulatory element |
| Name: | mini-ykkC |
| RFAM: | RF01068 |
| Regulation mode: | |
| Biological process: | Multidrug resistance |
| Effector: | |
| Phylum: | Proteobacteria |
Member of regulog collections
- By taxonomy - Caulobacterales
- By RNA motif - mini-ykkC
- By pathway - Multidrug resistance
| Genome | Genes | Operons |
|---|---|---|
| Caulobacter crescentus CB15 | 1 | 1 |
| Caulobacter segnis ATCC 21756 | 1 | 1 |
| Caulobacter sp. K31 | 1 | 1 |
| Phenylobacterium zucineum HLK1 | 1 | 1 |
| Genes | Function | ||||
|---|---|---|---|---|---|
| CRON 1. | |||||
| ykkC |
*
Caulobacter crescentus CB15 Site: position = -68 score = 46.46 sequence = GGCGCGGGGACGACC... Gene: CC3443: Quaternary ammonium compound-resistance protein sugE |
*
Caulobacter segnis ATCC 21756 Site: position = -69 score = 50.41 sequence = CGCGGGGACGACCCC... Gene: Cseg_0241: Quaternary ammonium compound-resistance protein sugE |
*
Caulobacter sp. K31 Site: position = -128 score = 46.86 sequence = GGCGCGGGGACGACC... Gene: Caul_4732: Quaternary ammonium compound-resistance protein sugE |
*
Phenylobacterium zucineum HLK1 Site: position = -69 score = 42.73 sequence = GCCGGGGACGACCCC... Gene: PHZ_c0240: Quaternary ammonium compound-resistance protein sugE |
Quaternary ammonium compound-resistance protein sugE |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |