Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog YbzH - Bacillales

Properties
Regulator type: Transcription factor
Regulator family: ArsR
Regulation mode: repressor
Biological process: Metabolite transport
Effector:
Phylum: Firmicutes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 8 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Anoxybacillus flavithermus WK1
Bacillus amyloliquefaciens FZB42 2 2
Bacillus cereus ATCC 14579
Bacillus clausii KSM-K16 2 2
Bacillus halodurans C-125
Bacillus licheniformis DSM 13 2 2
Bacillus pumilus SAFR-032
Bacillus subtilis subsp. subtilis str. 168 2 2
Geobacillus kaustophilus HTA426
Oceanobacillus iheyensis HTE831
Paenibacillus sp. JDR-2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
ybzH
 
Anoxybacillus flavithermus WK1
*
Bacillus amyloliquefaciens FZB42

Site:
position = -30
score = 6.4094
sequence = ATATCGTAAAATCACGATAT

Gene: RBAM_018560: Transcriptional regulator, ArsR family
 
Bacillus cereus ATCC 14579
*
Bacillus clausii KSM-K16

Site:
position = -30
score = 5.54045
sequence = ATATCGCAAAATGTAGATAT

Gene: ABC1381: Transcriptional regulator, ArsR family
 
Bacillus halodurans C-125
*
Bacillus licheniformis DSM 13

Site:
position = -29
score = 6.14853
sequence = ATATTGACAATTTTCGATAT

Gene: BLi00209: Transcriptional regulator, ArsR family
 
Bacillus pumilus SAFR-032
*
Bacillus subtilis subsp. subtilis str. 168

Site:
position = -30
score = 6.64061
sequence = ATATCGAAATATAACGATAT

Gene: BSU01889: Transcriptional regulator, ArsR family
 
Geobacillus kaustophilus HTA426
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Transcriptional regulator, ArsR family
 
CRON 2.
ybcL
 
Anoxybacillus flavithermus WK1
*
Bacillus amyloliquefaciens FZB42

Site:
position = -56
score = 6.24823
sequence = ATATCGATATATCACAATAT

Gene: RBAM_018550: Putative efflux transporter
 
Bacillus cereus ATCC 14579
*
Bacillus clausii KSM-K16

Site:
position = -75
score = 5.88857
sequence = ACATCGACATATCGCGATAT

Gene: ABC1382: Putative efflux transporter
 
Bacillus halodurans C-125
*
Bacillus licheniformis DSM 13

Site:
position = -93
score = 6.50132
sequence = ATATCGACATATTTCGATGT

Gene: BLi00210: Putative efflux transporter
 
Bacillus pumilus SAFR-032
*
Bacillus subtilis subsp. subtilis str. 168

Site:
position = -90
score = 6.44651
sequence = ATATCGACATATTACGATGT

Gene: BSU01890: Putative efflux transporter
 
Geobacillus kaustophilus HTA426
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Putative efflux transporter
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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