Regulog His_leader - Vibrionales

Properties
Regulator type:	RNA regulatory element
Name:	His_leader
RFAM:	RF00514
Regulation mode:
Biological process:	Histidine biosynthesis
Effector:
Phylum:	Proteobacteria

Member of regulog collections

By taxonomy - Vibrionales
By RNA motif - His_leader
By pathway - Histidine biosynthesis

Statistics of regulated genes
Genome	Genes	Operons
Vibrio cholerae O1 biovar eltor str. N16961	8	1
Vibrio vulnificus CMCP6	8	1
Vibrio harveyi ATCC BAA-1116	8	1
Vibrio parahaemolyticus RIMD 2210633	8	1
Vibrio shilonii AK1	8	1
Vibrio splendidus LGP32	8	1
Vibrio fischeri ES114	8	1
Vibrio salmonicida LFI1238	8	1
Vibrio angustum S14	8	1
Photobacterium profundum SS9	8	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes											Function

CRON 1.
hisG	* Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -170 score = 72.67 sequence = CATCACCATCATCAT... Gene: VC1132: ATP phosphoribosyltransferase (EC 2.4.2.17)	* Vibrio vulnificus CMCP6 Site: position = -181 score = 79.33 sequence = TTCATCACCATCATC... Gene: VV1_2920: ATP phosphoribosyltransferase (EC 2.4.2.17)	* Vibrio harveyi ATCC BAA-1116 Site: position = -191 score = 73.63 sequence = CATCACCATCATCAC... Gene: VIBHAR_01830: ATP phosphoribosyltransferase (EC 2.4.2.17)	* Vibrio parahaemolyticus RIMD 2210633 Site: position = -173 score = 76.9 sequence = CATCACCATCATCAC... Gene: VP1137: ATP phosphoribosyltransferase (EC 2.4.2.17)	* Vibrio shilonii AK1 Site: position = -176 score = 85.89 sequence = CATCACCATCATCAC... Gene: VSAK1_00185: ATP phosphoribosyltransferase (EC 2.4.2.17)	* Vibrio splendidus LGP32 Site: position = -172 score = 67.5 sequence = TTCATCACCATCATC... Gene: VS_2026: ATP phosphoribosyltransferase (EC 2.4.2.17)	* Vibrio fischeri ES114 Site: position = -244 score = 78.18 sequence = CATCACCACCATCAT... Gene: VF_1012: ATP phosphoribosyltransferase (EC 2.4.2.17)	* Vibrio salmonicida LFI1238 Site: position = -198 score = 77.89 sequence = CATCACCATCACCAT... Gene: VSAL_I1133: ATP phosphoribosyltransferase (EC 2.4.2.17)	* Vibrio angustum S14 Site: position = -178 score = 84.12 sequence = ATCATATTCATCATC... Gene: VAS14_17946: ATP phosphoribosyltransferase (EC 2.4.2.17)	* Photobacterium profundum SS9 Site: position = -189 score = 80.17 sequence = TACATCACCATCATC... Gene: PBPRA1092: ATP phosphoribosyltransferase (EC 2.4.2.17)	ATP phosphoribosyltransferase (EC 2.4.2.17)
hisD	Vibrio cholerae O1 biovar eltor str. N16961 Gene: VC1133: Histidinol dehydrogenase (EC 1.1.1.23)	Vibrio vulnificus CMCP6 Gene: VV1_2919: Histidinol dehydrogenase (EC 1.1.1.23)	Vibrio harveyi ATCC BAA-1116 Gene: VIBHAR_01831: Histidinol dehydrogenase (EC 1.1.1.23)	Vibrio parahaemolyticus RIMD 2210633 Gene: VP1138: Histidinol dehydrogenase (EC 1.1.1.23)	Vibrio shilonii AK1 Gene: VSAK1_00190: Histidinol dehydrogenase (EC 1.1.1.23)	Vibrio splendidus LGP32 Gene: VS_2025: Histidinol dehydrogenase (EC 1.1.1.23)	Vibrio fischeri ES114 Gene: VF_1013: Histidinol dehydrogenase (EC 1.1.1.23)	Vibrio salmonicida LFI1238 Gene: VSAL_I1134: Histidinol dehydrogenase (EC 1.1.1.23)	Vibrio angustum S14 Gene: VAS14_17941: Histidinol dehydrogenase (EC 1.1.1.23)	Photobacterium profundum SS9 Gene: PBPRA1091: Histidinol dehydrogenase (EC 1.1.1.23)	Histidinol dehydrogenase (EC 1.1.1.23)
hisC	Vibrio cholerae O1 biovar eltor str. N16961 Gene: VC1134: Histidinol-phosphate aminotransferase (EC 2.6.1.9)	Vibrio vulnificus CMCP6 Gene: VV1_2918: Histidinol-phosphate aminotransferase (EC 2.6.1.9)	Vibrio harveyi ATCC BAA-1116 Gene: VIBHAR_01832: Histidinol-phosphate aminotransferase (EC 2.6.1.9)	Vibrio parahaemolyticus RIMD 2210633 Gene: VP1139: Histidinol-phosphate aminotransferase (EC 2.6.1.9)	Vibrio shilonii AK1 Gene: VSAK1_00195: Histidinol-phosphate aminotransferase (EC 2.6.1.9)	Vibrio splendidus LGP32 Gene: VS_2024: Histidinol-phosphate aminotransferase (EC 2.6.1.9)	Vibrio fischeri ES114 Gene: VF_1014: Histidinol-phosphate aminotransferase (EC 2.6.1.9)	Vibrio salmonicida LFI1238 Gene: VSAL_I1135: Histidinol-phosphate aminotransferase (EC 2.6.1.9)	Vibrio angustum S14 Gene: VAS14_17936: Histidinol-phosphate aminotransferase (EC 2.6.1.9)	Photobacterium profundum SS9 Gene: PBPRA1090: Histidinol-phosphate aminotransferase (EC 2.6.1.9)	Histidinol-phosphate aminotransferase (EC 2.6.1.9)
hisB	Vibrio cholerae O1 biovar eltor str. N16961 Gene: VC1135: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)	Vibrio vulnificus CMCP6 Gene: VV1_2917: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)	Vibrio harveyi ATCC BAA-1116 Gene: VIBHAR_01833: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)	Vibrio parahaemolyticus RIMD 2210633 Gene: VP1140: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)	Vibrio shilonii AK1 Gene: VSAK1_00200: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)	Vibrio splendidus LGP32 Gene: VS_2023: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)	Vibrio fischeri ES114 Gene: VF_1015: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)	Vibrio salmonicida LFI1238 Gene: VSAL_I1136: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)	Vibrio angustum S14 Gene: VAS14_17931: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)	Photobacterium profundum SS9 Gene: PBPRA1089: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)	Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)
hisH	Vibrio cholerae O1 biovar eltor str. N16961 Gene: VC1136: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-)	Vibrio vulnificus CMCP6 Gene: VV1_2916: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-)	Vibrio harveyi ATCC BAA-1116 Gene: VIBHAR_01834: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-)	Vibrio parahaemolyticus RIMD 2210633 Gene: VP1141: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-)	Vibrio shilonii AK1 Gene: VSAK1_00205: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-)	Vibrio splendidus LGP32 Gene: VS_2022: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-)	Vibrio fischeri ES114 Gene: VF_1016: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-)	Vibrio salmonicida LFI1238 Gene: VSAL_I1137: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-)	Vibrio angustum S14 Gene: VAS14_17926: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-)	Photobacterium profundum SS9 Gene: PBPRA1088: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-)	Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-)
hisA	Vibrio cholerae O1 biovar eltor str. N16961 Gene: VC1137: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16)	Vibrio vulnificus CMCP6 Gene: VV1_2915: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16)	Vibrio harveyi ATCC BAA-1116 Gene: VIBHAR_01835: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16)	Vibrio parahaemolyticus RIMD 2210633 Gene: VP1142: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16)	Vibrio shilonii AK1 Gene: VSAK1_00210: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16)	Vibrio splendidus LGP32 Gene: VS_2021: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16)	Vibrio fischeri ES114 Gene: VF_1017: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16)	Vibrio salmonicida LFI1238 Gene: VSAL_I1138: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16)	Vibrio angustum S14 Gene: VAS14_17921: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16)	Photobacterium profundum SS9 Gene: PBPRA1087: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16)	Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16)
hisF	Vibrio cholerae O1 biovar eltor str. N16961 Gene: VC1138: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)	Vibrio vulnificus CMCP6 Gene: VV1_2914: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)	Vibrio harveyi ATCC BAA-1116 Gene: VIBHAR_01836: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)	Vibrio parahaemolyticus RIMD 2210633 Gene: VP1143: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)	Vibrio shilonii AK1 Gene: VSAK1_00215: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)	Vibrio splendidus LGP32 Gene: VS_2020: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)	Vibrio fischeri ES114 Gene: VF_1018: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)	Vibrio salmonicida LFI1238 Gene: VSAL_I1139: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)	Vibrio angustum S14 Gene: VAS14_17916: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)	Photobacterium profundum SS9 Gene: PBPRA1086: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)	Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)
hisI	Vibrio cholerae O1 biovar eltor str. N16961 Gene: VC1139: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)	Vibrio vulnificus CMCP6 Gene: VV1_2913: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)	Vibrio harveyi ATCC BAA-1116 Gene: VIBHAR_01837: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)	Vibrio parahaemolyticus RIMD 2210633 Gene: VP1144: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)	Vibrio shilonii AK1 Gene: VSAK1_00220: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)	Vibrio splendidus LGP32 Gene: VS_2019: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)	Vibrio fischeri ES114 Gene: VF_1019: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)	Vibrio salmonicida LFI1238 Gene: VSAL_I1140: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)	Vibrio angustum S14 Gene: VAS14_17911: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)	Photobacterium profundum SS9 Gene: PBPRA1085: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)	Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog His_leader - Vibrionales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --