Regulog Leu_leader - Vibrionales
| Regulator type: | RNA regulatory element |
| Name: | Leu_leader |
| RFAM: | RF00512 |
| Regulation mode: | |
| Biological process: | Branched-chain amino acid biosynthesis |
| Effector: | |
| Phylum: | Proteobacteria |
Member of regulog collections
- By taxonomy - Vibrionales
- By RNA motif - Leu_leader
- By pathway - Branched-chain amino acid biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Vibrio cholerae O1 biovar eltor str. N16961 | 4 | 1 |
| Vibrio vulnificus CMCP6 | 4 | 1 |
| Vibrio harveyi ATCC BAA-1116 | 4 | 1 |
| Vibrio parahaemolyticus RIMD 2210633 | 1 | 1 |
| Vibrio shilonii AK1 | 4 | 1 |
| Vibrio splendidus LGP32 | 4 | 1 |
| Vibrio fischeri ES114 | 4 | 1 |
| Vibrio salmonicida LFI1238 | 4 | 1 |
| Vibrio angustum S14 | 4 | 1 |
| Photobacterium profundum SS9 | 4 | 1 |
| Genes | Function | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||
| leuA |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -185 score = 35.66 sequence = ATGACAATGCGTTTT... Gene: VC2490: 2-isopropylmalate synthase (EC 2.3.3.13) |
*
Vibrio vulnificus CMCP6 Site: position = -190 score = 29.83 sequence = AAGATGACAGCACAT... Gene: VV1_0654: 2-isopropylmalate synthase (EC 2.3.3.13) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -111 score = 35.0 sequence = CAACTATGTCAGCTC... Gene: VIBHAR_00817: 2-isopropylmalate synthase (EC 2.3.3.13) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -197 score = 36.68 sequence = CAACTATGTCAGCTC... Gene: VP0346: 2-isopropylmalate synthase (EC 2.3.3.13) |
*
Vibrio shilonii AK1 Site: position = -185 score = 39.52 sequence = CATAACAGTGTCATT... Gene: VSAK1_07754: 2-isopropylmalate synthase (EC 2.3.3.13) |
*
Vibrio splendidus LGP32 Site: position = -128 score = 22.12 sequence = TCAAGAACTACACAA... Gene: VS_0380: 2-isopropylmalate synthase (EC 2.3.3.13) |
*
Vibrio fischeri ES114 Site: position = -174 score = 36.84 sequence = ATGAAAACAGTATCT... Gene: VF_0295: 2-isopropylmalate synthase (EC 2.3.3.13) |
*
Vibrio salmonicida LFI1238 Site: position = -174 score = 40.35 sequence = ATGAAAACAGCATCT... Gene: VSAL_I0377: 2-isopropylmalate synthase (EC 2.3.3.13) |
*
Vibrio angustum S14 Site: position = -188 score = 36.26 sequence = AAAAAACGTTTCTCT... Gene: VAS14_08170: 2-isopropylmalate synthase (EC 2.3.3.13) |
*
Photobacterium profundum SS9 Site: position = -201 score = 34.36 sequence = AAAAAATGAAAAATC... Gene: PBPRA0419: 2-isopropylmalate synthase (EC 2.3.3.13) |
2-isopropylmalate synthase (EC 2.3.3.13) |
| leuB |
Gene: VC2491: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) |
Gene: VV1_0655: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) |
Gene: VIBHAR_00816: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) |
Gene: VP0344: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) |
Gene: VSAK1_07749: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) |
Gene: VS_0379: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) |
Gene: VF_0294: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) |
Gene: VSAL_I0376: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) |
Gene: VAS14_08175: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) |
Gene: PBPRA0418: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) |
3-isopropylmalate dehydrogenase (EC 1.1.1.85) |
| leuC |
Gene: VC2492: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) |
Gene: VV1_0656: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) |
Gene: VIBHAR_00815: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) |
Gene: VP0343: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) |
Gene: VSAK1_07744: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) |
Gene: VS_0378: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) |
Gene: VF_0293: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) |
Gene: VSAL_I0375: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) |
Gene: VAS14_08180: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) |
Gene: PBPRA0417: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) |
3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) |
| leuD |
Gene: VC2493: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) |
Gene: VV1_0657: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) |
Gene: VIBHAR_00814: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) |
Gene: VP0342: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) |
Gene: VSAK1_07739: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) |
Gene: VS_0377: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) |
Gene: VF_0292: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) |
Gene: VSAL_I0374: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) |
Gene: VAS14_08185: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) |
Gene: PBPRA0416: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) |
3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |