Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog Leu_leader - Vibrionales

Properties
Regulator type: RNA regulatory element
Name: Leu_leader
RFAM: RF00512
Regulation mode:
Biological process: Branched-chain amino acid biosynthesis
Effector:
Phylum: Proteobacteria
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Vibrio cholerae O1 biovar eltor str. N16961 4 1
Vibrio vulnificus CMCP6 4 1
Vibrio harveyi ATCC BAA-1116 4 1
Vibrio parahaemolyticus RIMD 2210633 1 1
Vibrio shilonii AK1 4 1
Vibrio splendidus LGP32 4 1
Vibrio fischeri ES114 4 1
Vibrio salmonicida LFI1238 4 1
Vibrio angustum S14 4 1
Photobacterium profundum SS9 4 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
leuA
*
Vibrio cholerae O1 biovar eltor str. N16961

Site:
position = -185
score = 35.66
sequence = ATGACAATGCGTTTT...

Gene: VC2490: 2-isopropylmalate synthase (EC 2.3.3.13)
*
Vibrio vulnificus CMCP6

Site:
position = -190
score = 29.83
sequence = AAGATGACAGCACAT...

Gene: VV1_0654: 2-isopropylmalate synthase (EC 2.3.3.13)
*
Vibrio harveyi ATCC BAA-1116

Site:
position = -111
score = 35.0
sequence = CAACTATGTCAGCTC...

Gene: VIBHAR_00817: 2-isopropylmalate synthase (EC 2.3.3.13)
*
Vibrio parahaemolyticus RIMD 2210633

Site:
position = -197
score = 36.68
sequence = CAACTATGTCAGCTC...

Gene: VP0346: 2-isopropylmalate synthase (EC 2.3.3.13)
*
Vibrio shilonii AK1

Site:
position = -185
score = 39.52
sequence = CATAACAGTGTCATT...

Gene: VSAK1_07754: 2-isopropylmalate synthase (EC 2.3.3.13)
*
Vibrio splendidus LGP32

Site:
position = -128
score = 22.12
sequence = TCAAGAACTACACAA...

Gene: VS_0380: 2-isopropylmalate synthase (EC 2.3.3.13)
*
Vibrio fischeri ES114

Site:
position = -174
score = 36.84
sequence = ATGAAAACAGTATCT...

Gene: VF_0295: 2-isopropylmalate synthase (EC 2.3.3.13)
*
Vibrio salmonicida LFI1238

Site:
position = -174
score = 40.35
sequence = ATGAAAACAGCATCT...

Gene: VSAL_I0377: 2-isopropylmalate synthase (EC 2.3.3.13)
*
Vibrio angustum S14

Site:
position = -188
score = 36.26
sequence = AAAAAACGTTTCTCT...

Gene: VAS14_08170: 2-isopropylmalate synthase (EC 2.3.3.13)
*
Photobacterium profundum SS9

Site:
position = -201
score = 34.36
sequence = AAAAAATGAAAAATC...

Gene: PBPRA0419: 2-isopropylmalate synthase (EC 2.3.3.13)
2-isopropylmalate synthase (EC 2.3.3.13)
leuB
 
Vibrio cholerae O1 biovar eltor str. N16961

Gene: VC2491: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
 
Vibrio vulnificus CMCP6

Gene: VV1_0655: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
 
Vibrio harveyi ATCC BAA-1116

Gene: VIBHAR_00816: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
 
Vibrio parahaemolyticus RIMD 2210633

Gene: VP0344: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
 
Vibrio shilonii AK1

Gene: VSAK1_07749: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
 
Vibrio splendidus LGP32

Gene: VS_0379: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
 
Vibrio fischeri ES114

Gene: VF_0294: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
 
Vibrio salmonicida LFI1238

Gene: VSAL_I0376: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
 
Vibrio angustum S14

Gene: VAS14_08175: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
 
Photobacterium profundum SS9

Gene: PBPRA0418: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
3-isopropylmalate dehydrogenase (EC 1.1.1.85)
leuC
 
Vibrio cholerae O1 biovar eltor str. N16961

Gene: VC2492: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
 
Vibrio vulnificus CMCP6

Gene: VV1_0656: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
 
Vibrio harveyi ATCC BAA-1116

Gene: VIBHAR_00815: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
 
Vibrio parahaemolyticus RIMD 2210633

Gene: VP0343: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
 
Vibrio shilonii AK1

Gene: VSAK1_07744: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
 
Vibrio splendidus LGP32

Gene: VS_0378: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
 
Vibrio fischeri ES114

Gene: VF_0293: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
 
Vibrio salmonicida LFI1238

Gene: VSAL_I0375: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
 
Vibrio angustum S14

Gene: VAS14_08180: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
 
Photobacterium profundum SS9

Gene: PBPRA0417: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
leuD
 
Vibrio cholerae O1 biovar eltor str. N16961

Gene: VC2493: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
 
Vibrio vulnificus CMCP6

Gene: VV1_0657: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
 
Vibrio harveyi ATCC BAA-1116

Gene: VIBHAR_00814: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
 
Vibrio parahaemolyticus RIMD 2210633

Gene: VP0342: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
 
Vibrio shilonii AK1

Gene: VSAK1_07739: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
 
Vibrio splendidus LGP32

Gene: VS_0377: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
 
Vibrio fischeri ES114

Gene: VF_0292: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
 
Vibrio salmonicida LFI1238

Gene: VSAL_I0374: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
 
Vibrio angustum S14

Gene: VAS14_08185: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
 
Photobacterium profundum SS9

Gene: PBPRA0416: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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