Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog Purine - Vibrionales

Properties
Regulator type: RNA regulatory element
Name: Purine
RFAM: RF00167
Regulation mode:
Biological process: Purine metabolism
Effector: Guanine; Adenine
Phylum: Proteobacteria
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Vibrio cholerae O1 biovar eltor str. N16961
Vibrio vulnificus CMCP6 1 1
Vibrio harveyi ATCC BAA-1116 1 1
Vibrio parahaemolyticus RIMD 2210633 1 1
Vibrio shilonii AK1 1 1
Vibrio splendidus LGP32 1 1
Vibrio fischeri ES114
Vibrio salmonicida LFI1238
Vibrio angustum S14
Photobacterium profundum SS9 1 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
pbuG
 
Vibrio cholerae O1 biovar eltor str. N16961
 
Vibrio vulnificus CMCP6
 
Vibrio harveyi ATCC BAA-1116
 
Vibrio parahaemolyticus RIMD 2210633
 
Vibrio shilonii AK1

Gene: VSAK1_09738: Xanthine/uracil/thiamine/ascorbate permease family protein
*
Vibrio splendidus LGP32

Site:
position = -157
score = 44.67
sequence = CCGCGCAAACGATTA...

Gene: VS_0162: Xanthine/uracil/thiamine/ascorbate permease family protein
 
Vibrio fischeri ES114
 
Vibrio salmonicida LFI1238
 
Vibrio angustum S14
 
Photobacterium profundum SS9
Xanthine/uracil/thiamine/ascorbate permease family protein
 
CRON 2.
add
 
Vibrio cholerae O1 biovar eltor str. N16961
*
Vibrio vulnificus CMCP6

Site:
position = -122
score = 68.42
sequence = ACTTTCGGCGATCAA...

Gene: VV20468: Adenosine deaminase (EC 3.5.4.4)
*
Vibrio harveyi ATCC BAA-1116

Site:
position = -199
score = 66.82
sequence = TATAATCGCGCCGTT...

Gene: VIBHAR_06421: Adenosine deaminase (EC 3.5.4.4)
*
Vibrio parahaemolyticus RIMD 2210633

Site:
position = -188
score = 68.27
sequence = ATAATCGCAAGCGTT...

Gene: VPA1292: Adenosine deaminase (EC 3.5.4.4)
*2
Vibrio shilonii AK1

Site:
position = -193
score = 71.46
sequence = ACAATACCAATCGTT...

Gene: VSAK1_22104: Adenosine deaminase (EC 3.5.4.4)

Gene: VSAK1_22004: Adenosine deaminase (EC 3.5.4.4)
 
Vibrio splendidus LGP32

Gene: VS_II0073: Adenosine deaminase (EC 3.5.4.4)
 
Vibrio fischeri ES114
 
Vibrio salmonicida LFI1238
 
Vibrio angustum S14
*2
Photobacterium profundum SS9

Site:
position = -179
score = 76.07
sequence = GTAATAATGGGTAAA...

Gene: PBPRB1379: Adenosine deaminase (EC 3.5.4.4)

Gene: PBPRB1184: Adenosine deaminase (EC 3.5.4.4)
Adenosine deaminase (EC 3.5.4.4)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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