Regulog Purine - Vibrionales
| Regulator type: | RNA regulatory element |
| Name: | Purine |
| RFAM: | RF00167 |
| Regulation mode: | |
| Biological process: | Purine metabolism |
| Effector: | Guanine; Adenine |
| Phylum: | Proteobacteria |
Member of regulog collections
- By taxonomy - Vibrionales
- By RNA motif - Purine
- By effector - Guanine
- By effector - Adenine
- By pathway - Purine metabolism
| Genome | Genes | Operons |
|---|---|---|
| Vibrio cholerae O1 biovar eltor str. N16961 | ||
| Vibrio vulnificus CMCP6 | 1 | 1 |
| Vibrio harveyi ATCC BAA-1116 | 1 | 1 |
| Vibrio parahaemolyticus RIMD 2210633 | 1 | 1 |
| Vibrio shilonii AK1 | 1 | 1 |
| Vibrio splendidus LGP32 | 1 | 1 |
| Vibrio fischeri ES114 | ||
| Vibrio salmonicida LFI1238 | ||
| Vibrio angustum S14 | ||
| Photobacterium profundum SS9 | 1 | 1 |
| Genes | Function | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||
| pbuG |
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Gene: VSAK1_09738: Xanthine/uracil/thiamine/ascorbate permease family protein |
*
Vibrio splendidus LGP32 Site: position = -157 score = 44.67 sequence = CCGCGCAAACGATTA... Gene: VS_0162: Xanthine/uracil/thiamine/ascorbate permease family protein |
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Xanthine/uracil/thiamine/ascorbate permease family protein |
| CRON 2. | |||||||||||
| add |
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*
Vibrio vulnificus CMCP6 Site: position = -122 score = 68.42 sequence = ACTTTCGGCGATCAA... Gene: VV20468: Adenosine deaminase (EC 3.5.4.4) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -199 score = 66.82 sequence = TATAATCGCGCCGTT... Gene: VIBHAR_06421: Adenosine deaminase (EC 3.5.4.4) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -188 score = 68.27 sequence = ATAATCGCAAGCGTT... Gene: VPA1292: Adenosine deaminase (EC 3.5.4.4) |
*2
Vibrio shilonii AK1 Site: position = -193 score = 71.46 sequence = ACAATACCAATCGTT... Gene: VSAK1_22104: Adenosine deaminase (EC 3.5.4.4) Gene: VSAK1_22004: Adenosine deaminase (EC 3.5.4.4) |
Gene: VS_II0073: Adenosine deaminase (EC 3.5.4.4) |
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*2
Photobacterium profundum SS9 Site: position = -179 score = 76.07 sequence = GTAATAATGGGTAAA... Gene: PBPRB1379: Adenosine deaminase (EC 3.5.4.4) Gene: PBPRB1184: Adenosine deaminase (EC 3.5.4.4) |
Adenosine deaminase (EC 3.5.4.4) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |