Regulog mini-ykkC - Vibrionales

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Vibrio cholerae O1 biovar eltor str. N16961	1	1
Vibrio vulnificus CMCP6
Vibrio harveyi ATCC BAA-1116	2	1
Vibrio parahaemolyticus RIMD 2210633	1	1
Vibrio shilonii AK1
Vibrio splendidus LGP32
Vibrio fischeri ES114
Vibrio salmonicida LFI1238
Vibrio angustum S14
Photobacterium profundum SS9

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes											Function

CRON 1.
ykkC	* Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -63 score = 47.84 sequence = AGTGAGGACGACCTC... Gene: VC1393: Quaternary ammonium compound-resistance protein sugE	Vibrio vulnificus CMCP6	2 Vibrio harveyi ATCC BAA-1116* Site: position = -66 score = 48.47 sequence = GAAGTGAGGACGACC... Gene: VIBHAR_05880: Quaternary ammonium compound-resistance protein sugE Gene: VIBHAR_05879: Quaternary ammonium compound-resistance protein sugE	* Vibrio parahaemolyticus RIMD 2210633 Site: position = -66 score = 48.97 sequence = AGTGAGGACGACCTC... Gene: VPA0756: Quaternary ammonium compound-resistance protein sugE	Vibrio shilonii AK1	Vibrio splendidus LGP32	Vibrio fischeri ES114	Vibrio salmonicida LFI1238	Vibrio angustum S14	Photobacterium profundum SS9	Quaternary ammonium compound-resistance protein sugE

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --