Regulog T-box(Ile) - Mycobacteriaceae
| Regulator type: | RNA regulatory element |
| Name: | T-box |
| RFAM: | RF00230 |
| Regulation mode: | |
| Biological process: | Amino acid metabolism |
| Effector: | Ile-tRNA |
| Phylum: | Actinobacteria |
Member of regulog collections
- By taxonomy - Mycobacteriaceae
- By RNA motif - T-box
- By effector - Ile-tRNA
- By pathway - Amino acid metabolism
| Genome | Genes | Operons |
|---|---|---|
| Mycobacterium tuberculosis H37Rv | 1 | 1 |
| Mycobacterium leprae TN | 1 | 1 |
| Mycobacterium marinum M | 1 | 1 |
| Mycobacterium avium 104 | ||
| Mycobacterium sp. JLS | ||
| Mycobacterium vanbaalenii PYR-1 | 1 | 1 |
| Mycobacterium flavescens PYR-GCK | 1 | 1 |
| Mycobacterium smegmatis str. MC2 155 | 1 | 1 |
| Mycobacterium abscessus ATCC 19977 | 1 | 1 |
| Genes | Function | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||
| ileS |
*
Mycobacterium tuberculosis H37Rv Site: position = -230 score = 20.55 sequence = GAACGGCATCGATCC... Gene: Rv1536: Isoleucyl-tRNA synthetase (EC 6.1.1.5) |
*
Mycobacterium leprae TN Site: position = -213 score = 27.89 sequence = TAACGGCGTCGATCC... Gene: ML1195: Isoleucyl-tRNA synthetase (EC 6.1.1.5) |
*
Mycobacterium marinum M Site: position = -197 score = 47.33 sequence = CAACAGCGTTGATCC... Gene: MMAR_2356: Isoleucyl-tRNA synthetase (EC 6.1.1.5) |
Gene: MAV_3235: Isoleucyl-tRNA synthetase (EC 6.1.1.5) |
Gene: Mjls_3120: Isoleucyl-tRNA synthetase (EC 6.1.1.5) |
*
Mycobacterium vanbaalenii PYR-1 Site: position = -228 score = 18.77 sequence = GATCGGCGTCGATCC... Gene: Mvan_2769: Isoleucyl-tRNA synthetase (EC 6.1.1.5) |
*
Mycobacterium flavescens PYR-GCK Site: position = -208 score = 19.09 sequence = TCCATCGGCGTCGAT... Gene: Mflv_3644: Isoleucyl-tRNA synthetase (EC 6.1.1.5) |
*
Mycobacterium smegmatis str. MC2 155 Site: position = -232 score = 28.48 sequence = CATCGGCGCTGATCC... Gene: MSMEG_3169: Isoleucyl-tRNA synthetase (EC 6.1.1.5) |
*
Mycobacterium abscessus ATCC 19977 Site: position = -224 score = 31.9 sequence = CATATCAACGCACCC... Gene: MAB_2705c: Isoleucyl-tRNA synthetase (EC 6.1.1.5) |
Isoleucyl-tRNA synthetase (EC 6.1.1.5) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |