Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog T-box(Ile) - Mycobacteriaceae

Properties
Regulator type: RNA regulatory element
Name: T-box
RFAM: RF00230
Regulation mode:
Biological process: Amino acid metabolism
Effector: Ile-tRNA
Phylum: Actinobacteria
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Mycobacterium tuberculosis H37Rv 1 1
Mycobacterium leprae TN 1 1
Mycobacterium marinum M 1 1
Mycobacterium avium 104
Mycobacterium sp. JLS
Mycobacterium vanbaalenii PYR-1 1 1
Mycobacterium flavescens PYR-GCK 1 1
Mycobacterium smegmatis str. MC2 155 1 1
Mycobacterium abscessus ATCC 19977 1 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
ileS
*
Mycobacterium tuberculosis H37Rv

Site:
position = -230
score = 20.55
sequence = GAACGGCATCGATCC...

Gene: Rv1536: Isoleucyl-tRNA synthetase (EC 6.1.1.5)
*
Mycobacterium leprae TN

Site:
position = -213
score = 27.89
sequence = TAACGGCGTCGATCC...

Gene: ML1195: Isoleucyl-tRNA synthetase (EC 6.1.1.5)
*
Mycobacterium marinum M

Site:
position = -197
score = 47.33
sequence = CAACAGCGTTGATCC...

Gene: MMAR_2356: Isoleucyl-tRNA synthetase (EC 6.1.1.5)
 
Mycobacterium avium 104

Gene: MAV_3235: Isoleucyl-tRNA synthetase (EC 6.1.1.5)
 
Mycobacterium sp. JLS

Gene: Mjls_3120: Isoleucyl-tRNA synthetase (EC 6.1.1.5)
*
Mycobacterium vanbaalenii PYR-1

Site:
position = -228
score = 18.77
sequence = GATCGGCGTCGATCC...

Gene: Mvan_2769: Isoleucyl-tRNA synthetase (EC 6.1.1.5)
*
Mycobacterium flavescens PYR-GCK

Site:
position = -208
score = 19.09
sequence = TCCATCGGCGTCGAT...

Gene: Mflv_3644: Isoleucyl-tRNA synthetase (EC 6.1.1.5)
*
Mycobacterium smegmatis str. MC2 155

Site:
position = -232
score = 28.48
sequence = CATCGGCGCTGATCC...

Gene: MSMEG_3169: Isoleucyl-tRNA synthetase (EC 6.1.1.5)
*
Mycobacterium abscessus ATCC 19977

Site:
position = -224
score = 31.9
sequence = CATATCAACGCACCC...

Gene: MAB_2705c: Isoleucyl-tRNA synthetase (EC 6.1.1.5)
Isoleucyl-tRNA synthetase (EC 6.1.1.5)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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