Regulog T-box(Ile) - Deinococcus-Thermus
| Regulator type: | RNA regulatory element |
| Name: | T-box |
| RFAM: | RF00230 |
| Regulation mode: | |
| Biological process: | Amino acid metabolism |
| Effector: | Ile-tRNA |
| Phylum: | Deinococcus-Thermus |
Member of regulog collections
- By taxonomy - Deinococcus-Thermus
- By RNA motif - T-box
- By effector - Ile-tRNA
- By pathway - Amino acid metabolism
| Genome | Genes | Operons |
|---|---|---|
| Deinococcus radiodurans R1 | 1 | 1 |
| Deinococcus geothermalis DSM 11300 | 1 | 1 |
| Deinococcus deserti VCD115 | 1 | 1 |
| Thermus thermophilus HB27 | 1 | 1 |
| Thermus aquaticus Y51MC23 | 1 | 1 |
| Genes | Function | |||||
|---|---|---|---|---|---|---|
| CRON 1. | ||||||
| ileS |
*
Deinococcus radiodurans R1 Site: position = -211 score = 27.25 sequence = GAATGAGACCGCCAA... Gene: DR1335: Isoleucyl-tRNA synthetase (EC 6.1.1.5) |
*
Deinococcus geothermalis DSM 11300 Site: position = -277 score = 14.43 sequence = CGAGAAGAGTACGCG... Gene: Dgeo_1101: Isoleucyl-tRNA synthetase (EC 6.1.1.5) |
*
Deinococcus deserti VCD115 Site: position = -213 score = 19.41 sequence = AGTTGGGTGGTACCA... Gene: Deide_11660: Isoleucyl-tRNA synthetase (EC 6.1.1.5) |
*
Thermus thermophilus HB27 Site: position = -272 score = 47.21 sequence = TAAAGGCGAGGATGG... Gene: TTC0702: Isoleucyl-tRNA synthetase (EC 6.1.1.5) |
*
Thermus aquaticus Y51MC23 Site: position = -265 score = 58.84 sequence = TAAAGGCGAGGATGG... Gene: TaqDRAFT_4339: Isoleucyl-tRNA synthetase (EC 6.1.1.5) |
Isoleucyl-tRNA synthetase (EC 6.1.1.5) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |