Regulog NmlR - Streptococcaceae
| Regulator type: | Transcription factor |
| Regulator family: | MerR |
| Regulation mode: | activator |
| Biological process: | Carbonyl stress response |
| Effector: | Methylglyoxal; Formaldehyde; Nitric oxide |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Streptococcaceae
- By TF family - MerR
- By effector - Methylglyoxal
- By effector - Formaldehyde
- By effector - Nitric oxide
- By pathway - Carbonyl stress response
| Genome | Genes | Operons |
|---|---|---|
| Lactococcus lactis subsp. cremoris SK11 | 6 | 2 |
| Lactococcus lactis subsp. lactis Il1403 | 6 | 2 |
| Streptococcus agalactiae 2603V/R | 4 | 2 |
| Streptococcus dysgalactiae subsp. equisimilis GGS_124 | ||
| Streptococcus equi subsp. zooepidemicus MGCS10565 | ||
| Streptococcus gallolyticus UCN34 | 4 | 2 |
| Streptococcus gordonii str. Challis substr. CH1 | ||
| Streptococcus mitis B6 | ||
| Streptococcus mutans UA159 | 4 | 2 |
| Streptococcus pneumoniae TIGR4 | 2 | 1 |
| Streptococcus pyogenes M1 GAS | ||
| Streptococcus sanguinis SK36 | ||
| Streptococcus suis 05ZYH33 | 1 | 1 |
| Streptococcus thermophilus CNRZ1066 | ||
| Streptococcus uberis 0140J | 4 | 2 |
| Genes | Function | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||||||
| ypiA |
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Lactococcus lactis subsp. cremoris SK11 Site: position = -50 score = 6.28964 sequence = AGTTGACTTGAAGTGGACT Gene: LACR_1627: Short chain dehydrogenase |
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Lactococcus lactis subsp. lactis Il1403 Site: position = -65 score = 6.47133 sequence = AGTTGACTTGAAGTGAACT Gene: L179660: Short chain dehydrogenase |
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Short chain dehydrogenase |
| yphK |
Gene: LACR_1626: hypothetical protein |
Gene: L179277: hypothetical protein |
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hypothetical protein |
| yphJ |
Gene: LACR_1625: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) |
Gene: L178933: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) |
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4-carboxymuconolactone decarboxylase (EC 4.1.1.44) |
| yphI |
Gene: LACR_1624: hypothetical protein |
Gene: L178621: hypothetical protein |
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hypothetical protein |
| yphH |
Gene: LACR_1623: Hypothetical protein |
Gene: L178204: Hypothetical protein |
Gene: SAG0426: Hypothetical protein |
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Gene: SUB1074: Hypothetical protein |
Hypothetical protein |
| nmlR |
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Lactococcus lactis subsp. cremoris SK11 Site: position = -39 score = 5.60265 sequence = TATTGACTTAAAGTTCACT Gene: LACR_2072: Carbonyl stress response transcriptional regulator, MerR family |
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Lactococcus lactis subsp. lactis Il1403 Site: position = -39 score = 5.60265 sequence = TATTGACTTAAAGTTCACT Gene: L0246: Carbonyl stress response transcriptional regulator, MerR family |
Gene: SAG0427: Carbonyl stress response transcriptional regulator, MerR family |
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Streptococcus gallolyticus UCN34 Site: position = -61 score = 6.32917 sequence = GCTTGACTTGGAGTTAGCT Gene: GALLO_0910: Carbonyl stress response transcriptional regulator, MerR family |
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Streptococcus mutans UA159 Site: position = -66 score = 6.62048 sequence = ACTTGACTTGAAGTAGACT Gene: SMU.677: Carbonyl stress response transcriptional regulator, MerR family |
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Streptococcus pneumoniae TIGR4 Site: position = -91 score = 6.85286 sequence = GCTTGACTTGGAGTCAACT Gene: SP_1856: Carbonyl stress response transcriptional regulator, MerR family |
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Gene: SSU05_0503: Carbonyl stress response transcriptional regulator, MerR family |
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Gene: SUB1075: Carbonyl stress response transcriptional regulator, MerR family |
Carbonyl stress response transcriptional regulator, MerR family |
| adhY |
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2
Streptococcus gallolyticus UCN34 Gene: GALLO_0911: Predicted aldo/keto reductase Gene: GALLO_1311: Predicted aldo/keto reductase |
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Streptococcus mutans UA159 Gene: SMU.678: Predicted aldo/keto reductase Gene: SMU.679: Predicted aldo/keto reductase |
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Predicted aldo/keto reductase |
| adhC |
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*2
Streptococcus agalactiae 2603V/R Site: position = -58 score = 6.76413 sequence = TCTTGACTTGAAGTTAACT Gene: SAG0428: Alcohol dehydrogenase, zinc-containing (EC 1.1.1.1) Site: position = -66 score = 6.80218 sequence = CCTTGACTTGGAGTTAACT Gene: SAG0429: Alcohol dehydrogenase, zinc-containing (EC 1.1.1.1) |
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*2
Streptococcus gallolyticus UCN34 Site: position = -73 score = 7.05071 sequence = ACTTGACTTGGAGTTAACT Gene: GALLO_1312: Alcohol dehydrogenase, zinc-containing (EC 1.1.1.1) Gene: GALLO_1932: Alcohol dehydrogenase, zinc-containing (EC 1.1.1.1) |
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Streptococcus mutans UA159 Site: position = -61 score = 6.39193 sequence = ACTTGACTTAGAGTCCACT Gene: SMU.1867c: Alcohol dehydrogenase, zinc-containing (EC 1.1.1.1) |
Gene: SP_1855: Alcohol dehydrogenase, zinc-containing (EC 1.1.1.1) |
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Gene: SSA_0921: Alcohol dehydrogenase, zinc-containing (EC 1.1.1.1) |
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Streptococcus suis 05ZYH33 Site: position = -12 score = 6.50938 sequence = ACTTGACTTAGAGTGAACT Gene: SSU05_1388: Alcohol dehydrogenase, zinc-containing (EC 1.1.1.1) |
Gene: str0936: Alcohol dehydrogenase, zinc-containing (EC 1.1.1.1) |
*2
Streptococcus uberis 0140J Site: position = -57 score = 6.86259 sequence = GCTTGACTTGAAGTTAACT Gene: SUB1076: Alcohol dehydrogenase, zinc-containing (EC 1.1.1.1) Site: position = -92 score = 5.82046 sequence = ACTTGACTTAGAGCCCACT Gene: SUB0101: Alcohol dehydrogenase, zinc-containing (EC 1.1.1.1) |
Alcohol dehydrogenase, zinc-containing (EC 1.1.1.1) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |