Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog XylR - Enterococcaceae

Properties
Regulator type: Transcription factor
Regulator family: ROK
Regulation mode: repressor
Biological process: Xylose utilization
Effector: Xylose
Phylum: Firmicutes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 4 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Enterococcus faecium DO
Enterococcus faecalis V583 8 2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
xylS
 
Enterococcus faecium DO
*
Enterococcus faecalis V583

Site:
position = -230
score = 6.06675
sequence = ATTAATTAGTTTAACGTGCTAAC

Site:
position = -158
score = 4.89887
sequence = GTTAATTAGTTTATCGTGAAAAC

Gene: EF0551: Alpha-xylosidase (EC 3.2.1.-)
Alpha-xylosidase (EC 3.2.1.-)
EF0552
 
Enterococcus faecium DO
 
Enterococcus faecalis V583

Gene: EF0552: Phosphotransferase system for xylose-containing disaccharide, EIIC component
Phosphotransferase system for xylose-containing disaccharide, EIIC component
EF0553
 
Enterococcus faecium DO
 
Enterococcus faecalis V583

Gene: EF0553: Phosphotransferase system for xylose-containing disaccharide, EIID component
Phosphotransferase system for xylose-containing disaccharide, EIID component
EF0554
 
Enterococcus faecium DO
 
Enterococcus faecalis V583

Gene: EF0554: Phosphotransferase system for xylose-containing disaccharide, EIIB component
Phosphotransferase system for xylose-containing disaccharide, EIIB component
EF0555
 
Enterococcus faecium DO
 
Enterococcus faecalis V583

Gene: EF0555: Phosphotransferase system for xylose-containing disaccharide, EIIA component
Phosphotransferase system for xylose-containing disaccharide, EIIA component
xylA
 
Enterococcus faecium DO
 
Enterococcus faecalis V583

Gene: EF0556: Xylose isomerase (EC 5.3.1.5)
Xylose isomerase (EC 5.3.1.5)
xylB
 
Enterococcus faecium DO
 
Enterococcus faecalis V583

Gene: EF0557: Xylulose kinase (EC 2.7.1.17)
Xylulose kinase (EC 2.7.1.17)
 
CRON 2.
xylR
 
Enterococcus faecium DO
*
Enterococcus faecalis V583

Site:
position = -231
score = 4.89887
sequence = GTTTTCACGATAAACTAATTAAC

Site:
position = -159
score = 6.06675
sequence = GTTAGCACGTTAAACTAATTAAT

Gene: EF0550: Xylose repressor XylR, ROK family
Xylose repressor XylR, ROK family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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