Regulog T-box(Trp) - Streptococcaceae
Regulator type: | RNA regulatory element |
Name: | T-box |
RFAM: | RF00230 |
Regulation mode: | |
Biological process: | Amino acid metabolism |
Effector: | Trp-tRNA |
Phylum: | Firmicutes |

Member of regulog collections
- By taxonomy - Streptococcaceae
- By RNA motif - T-box
- By effector - Trp-tRNA
- By pathway - Amino acid metabolism
Genome | Genes | Operons |
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Streptococcus pneumoniae TIGR4 | 10 | 2 |
Streptococcus gallolyticus UCN34 | 9 | 2 |
Streptococcus dysgalactiae subsp. equisimilis GGS_124 | 1 | 1 |
Streptococcus suis 05ZYH33 | 5 | 2 |
Lactococcus lactis subsp. lactis Il1403 | 10 | 2 |
Lactococcus lactis subsp. cremoris SK11 | 4 | 2 |
Streptococcus uberis 0140J | 1 | 1 |
Streptococcus agalactiae 2603V/R | ||
Streptococcus sanguinis SK36 | 9 | 3 |
Streptococcus pyogenes M1 GAS | 1 | 1 |
Streptococcus mutans UA159 | 8 | 1 |
Streptococcus thermophilus CNRZ1066 | 9 | 2 |
Streptococcus gordonii str. Challis substr. CH1 | 11 | 3 |
Streptococcus equi subsp. zooepidemicus MGCS10565 | 1 | 1 |
Streptococcus mitis B6 | 3 | 1 |
Genes | Function | |||||||||||||||
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CRON 1. | ||||||||||||||||
trpX |
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Streptococcus pneumoniae TIGR4 Site: position = -299 score = 105.62 sequence = TAACCATTCAGAAAA... Gene: SP_1069: Predicted ABC transporter for tryptophane, substrate-binding protein TrpX |
Gene: GALLO_0850: Predicted ABC transporter for tryptophane, substrate-binding protein TrpX |
Gene: SDEG_1257: Predicted ABC transporter for tryptophane, substrate-binding protein TrpX |
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Streptococcus suis 05ZYH33 Site: position = -372 score = 33.24 sequence = AGGAGAGTTAACGAA... Gene: SSU05_1487: Predicted ABC transporter for tryptophane, substrate-binding protein TrpX |
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Gene: SUB1110: Predicted ABC transporter for tryptophane, substrate-binding protein TrpX |
Gene: SAG1189: Predicted ABC transporter for tryptophane, substrate-binding protein TrpX |
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Streptococcus sanguinis SK36 Site: position = -359 score = 83.34 sequence = AAAATATAGGAAATT... Gene: SSA_0908: Predicted ABC transporter for tryptophane, substrate-binding protein TrpX |
Gene: SPy1016: Predicted ABC transporter for tryptophane, substrate-binding protein TrpX |
Gene: SMU.1447c: Predicted ABC transporter for tryptophane, substrate-binding protein TrpX |
Gene: str1190: Predicted ABC transporter for tryptophane, substrate-binding protein TrpX |
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Streptococcus gordonii str. Challis substr. CH1 Site: position = -278 score = 39.39 sequence = GTAATTTACTGATAA... Gene: SGO_0856: Predicted ABC transporter for tryptophane, substrate-binding protein TrpX |
Gene: Sez_1230: Predicted ABC transporter for tryptophane, substrate-binding protein TrpX |
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Streptococcus mitis B6 Site: position = -328 score = 104.92 sequence = TAACCATTCAGAAAA... Gene: smi_0988: Predicted ABC transporter for tryptophane, substrate-binding protein TrpX |
Predicted ABC transporter for tryptophane, substrate-binding protein TrpX |
trpY |
Gene: SP_1070: Predicted ABC transporter for tryptophane, permease protein TrpY |
Gene: GALLO_0851: Predicted ABC transporter for tryptophane, permease protein TrpY |
Gene: SDEG_1256: Predicted ABC transporter for tryptophane, permease protein TrpY |
Gene: SSU05_1486: Predicted ABC transporter for tryptophane, permease protein TrpY |
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Gene: SUB1109: Predicted ABC transporter for tryptophane, permease protein TrpY |
Gene: SAG1188: Predicted ABC transporter for tryptophane, permease protein TrpY |
Gene: SSA_2153: Predicted ABC transporter for tryptophane, permease protein TrpY |
Gene: SPy1018: Predicted ABC transporter for tryptophane, permease protein TrpY |
Gene: SMU.1446c: Predicted ABC transporter for tryptophane, permease protein TrpY |
Gene: str1189: Predicted ABC transporter for tryptophane, permease protein TrpY |
Gene: SGO_0857: Predicted ABC transporter for tryptophane, permease protein TrpY |
2
Streptococcus equi subsp. zooepidemicus MGCS10565 Gene: Sez_1228: Predicted ABC transporter for tryptophane, permease protein TrpY Gene: Sez_1229: Predicted ABC transporter for tryptophane, permease protein TrpY |
Gene: smi_0989: Predicted ABC transporter for tryptophane, permease protein TrpY |
Predicted ABC transporter for tryptophane, permease protein TrpY |
trpZ |
Gene: SP_1071: Predicted ABC transporter for tryptophane, ATP-binding protein TrpZ |
Gene: GALLO_0852: Predicted ABC transporter for tryptophane, ATP-binding protein TrpZ |
Gene: SDEG_1255: Predicted ABC transporter for tryptophane, ATP-binding protein TrpZ |
2
Streptococcus suis 05ZYH33 Gene: SSU05_1484: Predicted ABC transporter for tryptophane, ATP-binding protein TrpZ Gene: SSU05_1485: Predicted ABC transporter for tryptophane, ATP-binding protein TrpZ |
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Gene: SUB1108: Predicted ABC transporter for tryptophane, ATP-binding protein TrpZ |
Gene: SAG1187: Predicted ABC transporter for tryptophane, ATP-binding protein TrpZ |
Gene: SSA_2152: Predicted ABC transporter for tryptophane, ATP-binding protein TrpZ |
Gene: SPy1019: Predicted ABC transporter for tryptophane, ATP-binding protein TrpZ |
Gene: SMU.1445c: Predicted ABC transporter for tryptophane, ATP-binding protein TrpZ |
Gene: str1188: Predicted ABC transporter for tryptophane, ATP-binding protein TrpZ |
Gene: SGO_0858: Predicted ABC transporter for tryptophane, ATP-binding protein TrpZ |
Gene: Sez_1227: Predicted ABC transporter for tryptophane, ATP-binding protein TrpZ |
Gene: smi_0990: Predicted ABC transporter for tryptophane, ATP-binding protein TrpZ |
Predicted ABC transporter for tryptophane, ATP-binding protein TrpZ |
CRON 2. | ||||||||||||||||
trpE |
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Streptococcus pneumoniae TIGR4 Site: position = -298 score = 92.45 sequence = AATAATAGATGGAAA... Gene: SP_1817: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa |
Gene: GALLO_0583: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa |
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Lactococcus lactis subsp. lactis Il1403 Site: position = -315 score = 45.08 sequence = TTTGAAAGTCGAGAA... Gene: L0054: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa |
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Lactococcus lactis subsp. cremoris SK11 Site: position = -312 score = 40.9 sequence = ATTTAAAGTCGAAAA... Gene: LACR_1560: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa |
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Streptococcus sanguinis SK36 Site: position = -404 score = 80.88 sequence = AATACCCAGCAGAAG... Gene: SSA_0632: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa |
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Gene: SMU.532: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa |
Gene: str1593: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa |
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Streptococcus gordonii str. Challis substr. CH1 Site: position = -402 score = 79.06 sequence = AATACCCAGCAGAAG... Gene: SGO_0657: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa |
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Gene: smi_0541: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa |
Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa |
trpG |
Gene: SP_1816: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) # TrpAb@PabAb |
Gene: GALLO_0584: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) # TrpAb@PabAb |
Gene: SDEG_0216: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) # TrpAb@PabAb |
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Gene: L0053: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) # TrpAb@PabAb |
Gene: LACR_1559: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) # TrpAb@PabAb |
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Gene: SAG0462: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) # TrpAb@PabAb |
Gene: SSA_0633: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) # TrpAb@PabAb |
Gene: SPy1991: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) # TrpAb@PabAb |
Gene: SMU.533: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) # TrpAb@PabAb |
Gene: str1592: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) # TrpAb@PabAb |
Gene: SGO_0658: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) # TrpAb@PabAb |
Gene: Sez_1795: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) # TrpAb@PabAb |
Gene: smi_0542: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) # TrpAb@PabAb |
Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) # TrpAb@PabAb |
trpD |
Gene: SP_1815: Anthranilate phosphoribosyltransferase (EC 2.4.2.18) |
Gene: GALLO_0585: Anthranilate phosphoribosyltransferase (EC 2.4.2.18) |
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Gene: L0052: Anthranilate phosphoribosyltransferase (EC 2.4.2.18) |
Gene: LACR_1558: Anthranilate phosphoribosyltransferase (EC 2.4.2.18) |
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Gene: SSA_0634: Anthranilate phosphoribosyltransferase (EC 2.4.2.18) |
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Gene: SMU.534: Anthranilate phosphoribosyltransferase (EC 2.4.2.18) |
Gene: str1591: Anthranilate phosphoribosyltransferase (EC 2.4.2.18) |
Gene: SGO_0659: Anthranilate phosphoribosyltransferase (EC 2.4.2.18) |
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Gene: smi_0543: Anthranilate phosphoribosyltransferase (EC 2.4.2.18) |
Anthranilate phosphoribosyltransferase (EC 2.4.2.18) |
trpC |
Gene: SP_1814: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) |
Gene: GALLO_0586: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) |
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Gene: L0051: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) |
Gene: LACR_1552: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) |
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Gene: SSA_0635: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) |
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Gene: SMU.535: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) |
Gene: str1590: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) |
Gene: SGO_0660: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) |
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Gene: smi_0544: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) |
Indole-3-glycerol phosphate synthase (EC 4.1.1.48) |
trpF |
Gene: SP_1813: Phosphoribosylanthranilate isomerase (EC 5.3.1.24) |
Gene: GALLO_0587: Phosphoribosylanthranilate isomerase (EC 5.3.1.24) |
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Gene: L0050: Phosphoribosylanthranilate isomerase (EC 5.3.1.24) |
Gene: LACR_1551: Phosphoribosylanthranilate isomerase (EC 5.3.1.24) |
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Gene: SSA_0636: Phosphoribosylanthranilate isomerase (EC 5.3.1.24) |
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Gene: SMU.536: Phosphoribosylanthranilate isomerase (EC 5.3.1.24) |
Gene: str1589: Phosphoribosylanthranilate isomerase (EC 5.3.1.24) |
Gene: SGO_0661: Phosphoribosylanthranilate isomerase (EC 5.3.1.24) |
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Gene: smi_0545: Phosphoribosylanthranilate isomerase (EC 5.3.1.24) |
Phosphoribosylanthranilate isomerase (EC 5.3.1.24) |
yojC |
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Gene: L96054: Acetyltransferase (EC 2.3.1.-) |
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Acetyltransferase (EC 2.3.1.-) |
yojB |
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Gene: L95697: Acetyltransferase (EC 2.3.1.-) |
Gene: LACR_1550: Acetyltransferase (EC 2.3.1.-) |
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Acetyltransferase (EC 2.3.1.-) |
trpB |
Gene: SP_1812: Tryptophan synthase beta chain (EC 4.2.1.20) |
Gene: GALLO_0588: Tryptophan synthase beta chain (EC 4.2.1.20) |
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Gene: L0049: Tryptophan synthase beta chain (EC 4.2.1.20) |
Gene: LACR_1549: Tryptophan synthase beta chain (EC 4.2.1.20) |
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Gene: SSA_0637: Tryptophan synthase beta chain (EC 4.2.1.20) |
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Gene: SMU.537: Tryptophan synthase beta chain (EC 4.2.1.20) |
Gene: str1588: Tryptophan synthase beta chain (EC 4.2.1.20) |
Gene: SGO_0662: Tryptophan synthase beta chain (EC 4.2.1.20) |
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Gene: smi_0546: Tryptophan synthase beta chain (EC 4.2.1.20) |
Tryptophan synthase beta chain (EC 4.2.1.20) |
trpA |
Gene: SP_1811: Tryptophan synthase alpha chain (EC 4.2.1.20) |
Gene: GALLO_0589: Tryptophan synthase alpha chain (EC 4.2.1.20) |
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Gene: L0048: Tryptophan synthase alpha chain (EC 4.2.1.20) |
Gene: LACR_1548: Tryptophan synthase alpha chain (EC 4.2.1.20) |
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Gene: SSA_0638: Tryptophan synthase alpha chain (EC 4.2.1.20) |
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Gene: SMU.538: Tryptophan synthase alpha chain (EC 4.2.1.20) |
Gene: str1587: Tryptophan synthase alpha chain (EC 4.2.1.20) |
2
Streptococcus gordonii str. Challis substr. CH1 Gene: SGO_0424: Tryptophan synthase alpha chain (EC 4.2.1.20) Gene: SGO_0663: Tryptophan synthase alpha chain (EC 4.2.1.20) |
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Gene: smi_0547: Tryptophan synthase alpha chain (EC 4.2.1.20) |
Tryptophan synthase alpha chain (EC 4.2.1.20) |
tyrA |
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Streptococcus gallolyticus UCN34 Site: position = -215 score = 38.83 sequence = AAAACAAAGTGAAGC... Gene: GALLO_0582: Chorismate mutase I (EC 5.4.99.5) |
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Streptococcus mutans UA159 Site: position = -287 score = 82.18 sequence = CGTAAGAAATAAATT... Gene: SMU.531: Chorismate mutase I (EC 5.4.99.5) |
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Streptococcus thermophilus CNRZ1066 Site: position = -337 score = 60.05 sequence = ACAATAGTGAGTAAA... Gene: str1594: Chorismate mutase I (EC 5.4.99.5) |
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Chorismate mutase I (EC 5.4.99.5) |
CRON 3. | ||||||||||||||||
trpS |
Gene: SP_2229: Tryptophanyl-tRNA synthetase (EC 6.1.1.2) ## type 2 |
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Streptococcus gallolyticus UCN34 Site: position = -257 score = 89.57 sequence = GAAGAAGATTCAGAA... Gene: GALLO_2256: Tryptophanyl-tRNA synthetase (EC 6.1.1.2) ## type 2 |
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Streptococcus dysgalactiae subsp. equisimilis GGS_124 Site: position = -298 score = 91.29 sequence = GAATAATGCTACGTT... Gene: SDEG_2167: Tryptophanyl-tRNA synthetase (EC 6.1.1.2) ## type 2 |
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Streptococcus suis 05ZYH33 Site: position = -188 score = 98.63 sequence = TATAATAGGAATCAA... Gene: SSU05_2184: Tryptophanyl-tRNA synthetase (EC 6.1.1.2) ## type 2 |
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Lactococcus lactis subsp. lactis Il1403 Site: position = -340 score = 94.12 sequence = TAAAATTTAAAACAA... Gene: L0358: Tryptophanyl-tRNA synthetase (EC 6.1.1.2) ## type 2 |
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Lactococcus lactis subsp. cremoris SK11 Site: position = -341 score = 92.29 sequence = TAAAATTTATTACAA... Gene: LACR_0058: Tryptophanyl-tRNA synthetase (EC 6.1.1.2) ## type 2 |
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Streptococcus uberis 0140J Site: position = -272 score = 98.31 sequence = TAAAATAATTTTGAA... Gene: SUB1863: Tryptophanyl-tRNA synthetase (EC 6.1.1.2) ## type 2 |
Gene: SAG2168: Tryptophanyl-tRNA synthetase (EC 6.1.1.2) ## type 2 |
Gene: SSA_2375: Tryptophanyl-tRNA synthetase (EC 6.1.1.2) ## type 2 |
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Streptococcus pyogenes M1 GAS Site: position = -297 score = 102.54 sequence = TAGAATAAATCTAAA... Gene: SPy2207: Tryptophanyl-tRNA synthetase (EC 6.1.1.2) ## type 2 |
Gene: SMU.2158c: Tryptophanyl-tRNA synthetase (EC 6.1.1.2) ## type 2 |
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Streptococcus thermophilus CNRZ1066 Site: position = -285 score = 82.14 sequence = AATAATAGTCATCAG... Gene: str2018: Tryptophanyl-tRNA synthetase (EC 6.1.1.2) ## type 2 |
Gene: SGO_0007: Tryptophanyl-tRNA synthetase (EC 6.1.1.2) ## type 2 |
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Streptococcus equi subsp. zooepidemicus MGCS10565 Site: position = -295 score = 91.2 sequence = TAGAATGGCCCTAAA... Gene: Sez_1954: Tryptophanyl-tRNA synthetase (EC 6.1.1.2) ## type 2 |
Gene: smi_2076: Tryptophanyl-tRNA synthetase (EC 6.1.1.2) ## type 2 |
Tryptophanyl-tRNA synthetase (EC 6.1.1.2) ## type 2 |
CRON 4. | ||||||||||||||||
trpB2 |
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Streptococcus sanguinis SK36 Site: position = -289 score = 101.59 sequence = TAAATCATCAGAAAA... Gene: SSA_0631: Tryptophan synthase beta chain (EC 4.2.1.20) |
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Streptococcus gordonii str. Challis substr. CH1 Site: position = -289 score = 101.48 sequence = TAAATCATCAGAAAA... Gene: SGO_0656: Tryptophan synthase beta chain (EC 4.2.1.20) |
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Tryptophan synthase beta chain (EC 4.2.1.20) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |