Regulog T-box(Thr) - Streptococcaceae

Properties
Regulator type:	RNA regulatory element
Name:	T-box
RFAM:	RF00230
Regulation mode:
Biological process:	Amino acid metabolism
Effector:	Thr-tRNA
Phylum:	Firmicutes

Member of regulog collections

By taxonomy - Streptococcaceae
By RNA motif - T-box
By effector - Thr-tRNA
By pathway - Amino acid metabolism

Statistics of regulated genes
Genome	Genes	Operons
Streptococcus pneumoniae TIGR4	2	1
Streptococcus gallolyticus UCN34	1	1
Streptococcus dysgalactiae subsp. equisimilis GGS_124	1	1
Streptococcus suis 05ZYH33	2	1
Lactococcus lactis subsp. lactis Il1403	1	1
Lactococcus lactis subsp. cremoris SK11	1	1
Streptococcus uberis 0140J	1	1
Streptococcus agalactiae 2603V/R	1	1
Streptococcus sanguinis SK36	2	1
Streptococcus pyogenes M1 GAS	1	1
Streptococcus mutans UA159	2	1
Streptococcus thermophilus CNRZ1066	2	1
Streptococcus gordonii str. Challis substr. CH1	2	1
Streptococcus equi subsp. zooepidemicus MGCS10565	1	1
Streptococcus mitis B6	1	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes																Function

CRON 1.
str0571	Streptococcus pneumoniae TIGR4	Streptococcus gallolyticus UCN34	Streptococcus dysgalactiae subsp. equisimilis GGS_124	Streptococcus suis 05ZYH33	Lactococcus lactis subsp. lactis Il1403	Lactococcus lactis subsp. cremoris SK11	Streptococcus uberis 0140J	Streptococcus agalactiae 2603V/R	Streptococcus sanguinis SK36	Streptococcus pyogenes M1 GAS	Streptococcus mutans UA159	* Streptococcus thermophilus CNRZ1066 Site: position = -185 score = 66.57 sequence = TATAATAACGCATAG... Gene: str0571: hypothetical protein	Streptococcus gordonii str. Challis substr. CH1	Streptococcus equi subsp. zooepidemicus MGCS10565	Streptococcus mitis B6	hypothetical protein
thrS	Streptococcus pneumoniae TIGR4 Gene: SP_1631: Threonyl-tRNA synthetase (EC 6.1.1.3)	* Streptococcus gallolyticus UCN34 Site: position = -324 score = 67.49 sequence = TATAATAACTTACGA... Gene: GALLO_1579: Threonyl-tRNA synthetase (EC 6.1.1.3)	* Streptococcus dysgalactiae subsp. equisimilis GGS_124 Site: position = -393 score = 76.75 sequence = TAATCTTGAAGACAA... Gene: SDEG_0549: Threonyl-tRNA synthetase (EC 6.1.1.3)	Streptococcus suis 05ZYH33 Gene: SSU05_1366: Threonyl-tRNA synthetase (EC 6.1.1.3)	* Lactococcus lactis subsp. lactis Il1403 Site: position = -319 score = 22.48 sequence = TACAGACTTTTTGTA... Gene: L0357: Threonyl-tRNA synthetase (EC 6.1.1.3)	* Lactococcus lactis subsp. cremoris SK11 Site: position = -264 score = 22.3 sequence = ATGAAAATTCTAGCA... Gene: LACR_2181: Threonyl-tRNA synthetase (EC 6.1.1.3)	* Streptococcus uberis 0140J Site: position = -260 score = 67.99 sequence = AATAACAAAGAAGAC... Gene: SUB0540: Threonyl-tRNA synthetase (EC 6.1.1.3)	* Streptococcus agalactiae 2603V/R Site: position = -406 score = 65.87 sequence = TAAAAAATGAAGACA... Gene: SAG0711: Threonyl-tRNA synthetase (EC 6.1.1.3)	Streptococcus sanguinis SK36 Gene: SSA_1571: Threonyl-tRNA synthetase (EC 6.1.1.3)	* Streptococcus pyogenes M1 GAS Site: position = -397 score = 75.79 sequence = CTATAATTATCTTGA... Gene: SPy0517: Threonyl-tRNA synthetase (EC 6.1.1.3)	Streptococcus mutans UA159 Gene: SMU.1586: Threonyl-tRNA synthetase (EC 6.1.1.3)	Streptococcus thermophilus CNRZ1066 Gene: str0572: Threonyl-tRNA synthetase (EC 6.1.1.3)	Streptococcus gordonii str. Challis substr. CH1 Gene: SGO_0778: Threonyl-tRNA synthetase (EC 6.1.1.3)	* Streptococcus equi subsp. zooepidemicus MGCS10565 Site: position = -292 score = 68.48 sequence = AATAATCAGGAAGAC... Gene: Sez_1405: Threonyl-tRNA synthetase (EC 6.1.1.3)	* Streptococcus mitis B6 Site: position = -304 score = 86.64 sequence = TATAATAATCCATAG... Gene: smi_0653: Threonyl-tRNA synthetase (EC 6.1.1.3)	Threonyl-tRNA synthetase (EC 6.1.1.3)
SMU.1587c	Streptococcus pneumoniae TIGR4	Streptococcus gallolyticus UCN34	Streptococcus dysgalactiae subsp. equisimilis GGS_124	Streptococcus suis 05ZYH33	Lactococcus lactis subsp. lactis Il1403	Lactococcus lactis subsp. cremoris SK11	Streptococcus uberis 0140J	Streptococcus agalactiae 2603V/R	Streptococcus sanguinis SK36	Streptococcus pyogenes M1 GAS	* Streptococcus mutans UA159 Site: position = -237 score = 80.83 sequence = TATAATAATTTTTGG... Gene: SMU.1587c: hypothetical protein	Streptococcus thermophilus CNRZ1066	Streptococcus gordonii str. Challis substr. CH1	Streptococcus equi subsp. zooepidemicus MGCS10565	Streptococcus mitis B6	hypothetical protein
SSU05_1367	Streptococcus pneumoniae TIGR4	Streptococcus gallolyticus UCN34	Streptococcus dysgalactiae subsp. equisimilis GGS_124	* Streptococcus suis 05ZYH33 Site: position = -239 score = 83.18 sequence = GTTATAATAGCTTTT... Gene: SSU05_1367: hypothetical protein	Lactococcus lactis subsp. lactis Il1403	Lactococcus lactis subsp. cremoris SK11	Streptococcus uberis 0140J	Streptococcus agalactiae 2603V/R	Streptococcus sanguinis SK36	Streptococcus pyogenes M1 GAS	Streptococcus mutans UA159	Streptococcus thermophilus CNRZ1066	Streptococcus gordonii str. Challis substr. CH1	Streptococcus equi subsp. zooepidemicus MGCS10565	Streptococcus mitis B6	hypothetical protein
SP_1630	* Streptococcus pneumoniae TIGR4 Site: position = -168 score = 89.52 sequence = ATAATCCATAGAGAC... Gene: SP_1630: hypothetical protein	Streptococcus gallolyticus UCN34	Streptococcus dysgalactiae subsp. equisimilis GGS_124	Streptococcus suis 05ZYH33	Lactococcus lactis subsp. lactis Il1403	Lactococcus lactis subsp. cremoris SK11	Streptococcus uberis 0140J	Streptococcus agalactiae 2603V/R	Streptococcus sanguinis SK36	Streptococcus pyogenes M1 GAS	Streptococcus mutans UA159	Streptococcus thermophilus CNRZ1066	Streptococcus gordonii str. Challis substr. CH1	Streptococcus equi subsp. zooepidemicus MGCS10565	Streptococcus mitis B6	hypothetical protein
SGO_0777	Streptococcus pneumoniae TIGR4	Streptococcus gallolyticus UCN34	Streptococcus dysgalactiae subsp. equisimilis GGS_124	Streptococcus suis 05ZYH33	Lactococcus lactis subsp. lactis Il1403	Lactococcus lactis subsp. cremoris SK11	Streptococcus uberis 0140J	Streptococcus agalactiae 2603V/R	Streptococcus sanguinis SK36	Streptococcus pyogenes M1 GAS	Streptococcus mutans UA159	Streptococcus thermophilus CNRZ1066	* Streptococcus gordonii str. Challis substr. CH1 Site: position = -300 score = 63.68 sequence = TGTTTCCTAGAGACA... Gene: SGO_0777: hypothetical protein	Streptococcus equi subsp. zooepidemicus MGCS10565	Streptococcus mitis B6	hypothetical protein
SSA_1572	Streptococcus pneumoniae TIGR4	Streptococcus gallolyticus UCN34	Streptococcus dysgalactiae subsp. equisimilis GGS_124	Streptococcus suis 05ZYH33	Lactococcus lactis subsp. lactis Il1403	Lactococcus lactis subsp. cremoris SK11	Streptococcus uberis 0140J	Streptococcus agalactiae 2603V/R	* Streptococcus sanguinis SK36 Site: position = -121 score = 64.26 sequence = CTATAATGTTTTCTA... Gene: SSA_1572: hypothetical protein	Streptococcus pyogenes M1 GAS	Streptococcus mutans UA159	Streptococcus thermophilus CNRZ1066	Streptococcus gordonii str. Challis substr. CH1	Streptococcus equi subsp. zooepidemicus MGCS10565	Streptococcus mitis B6	hypothetical protein

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog T-box(Thr) - Streptococcaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --