Regulog T-box(Thr) - Streptococcaceae
| Regulator type: | RNA regulatory element |
| Name: | T-box |
| RFAM: | RF00230 |
| Regulation mode: | |
| Biological process: | Amino acid metabolism |
| Effector: | Thr-tRNA |
| Phylum: | Firmicutes |
Member of regulog collections
- By taxonomy - Streptococcaceae
- By RNA motif - T-box
- By effector - Thr-tRNA
- By pathway - Amino acid metabolism
| Genes | Function | |||||||||||||||
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| CRON 1. | ||||||||||||||||
| str0571 |
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Streptococcus thermophilus CNRZ1066 Site: position = -185 score = 66.57 sequence = TATAATAACGCATAG... Gene: str0571: hypothetical protein |
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hypothetical protein |
| thrS |
Gene: SP_1631: Threonyl-tRNA synthetase (EC 6.1.1.3) |
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Streptococcus gallolyticus UCN34 Site: position = -324 score = 67.49 sequence = TATAATAACTTACGA... Gene: GALLO_1579: Threonyl-tRNA synthetase (EC 6.1.1.3) |
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Streptococcus dysgalactiae subsp. equisimilis GGS_124 Site: position = -393 score = 76.75 sequence = TAATCTTGAAGACAA... Gene: SDEG_0549: Threonyl-tRNA synthetase (EC 6.1.1.3) |
Gene: SSU05_1366: Threonyl-tRNA synthetase (EC 6.1.1.3) |
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Lactococcus lactis subsp. lactis Il1403 Site: position = -319 score = 22.48 sequence = TACAGACTTTTTGTA... Gene: L0357: Threonyl-tRNA synthetase (EC 6.1.1.3) |
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Lactococcus lactis subsp. cremoris SK11 Site: position = -264 score = 22.3 sequence = ATGAAAATTCTAGCA... Gene: LACR_2181: Threonyl-tRNA synthetase (EC 6.1.1.3) |
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Streptococcus uberis 0140J Site: position = -260 score = 67.99 sequence = AATAACAAAGAAGAC... Gene: SUB0540: Threonyl-tRNA synthetase (EC 6.1.1.3) |
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Streptococcus agalactiae 2603V/R Site: position = -406 score = 65.87 sequence = TAAAAAATGAAGACA... Gene: SAG0711: Threonyl-tRNA synthetase (EC 6.1.1.3) |
Gene: SSA_1571: Threonyl-tRNA synthetase (EC 6.1.1.3) |
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Streptococcus pyogenes M1 GAS Site: position = -397 score = 75.79 sequence = CTATAATTATCTTGA... Gene: SPy0517: Threonyl-tRNA synthetase (EC 6.1.1.3) |
Gene: SMU.1586: Threonyl-tRNA synthetase (EC 6.1.1.3) |
Gene: str0572: Threonyl-tRNA synthetase (EC 6.1.1.3) |
Gene: SGO_0778: Threonyl-tRNA synthetase (EC 6.1.1.3) |
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Streptococcus equi subsp. zooepidemicus MGCS10565 Site: position = -292 score = 68.48 sequence = AATAATCAGGAAGAC... Gene: Sez_1405: Threonyl-tRNA synthetase (EC 6.1.1.3) |
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Streptococcus mitis B6 Site: position = -304 score = 86.64 sequence = TATAATAATCCATAG... Gene: smi_0653: Threonyl-tRNA synthetase (EC 6.1.1.3) |
Threonyl-tRNA synthetase (EC 6.1.1.3) |
| SMU.1587c |
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Streptococcus mutans UA159 Site: position = -237 score = 80.83 sequence = TATAATAATTTTTGG... Gene: SMU.1587c: hypothetical protein |
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hypothetical protein |
| SSU05_1367 |
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Streptococcus suis 05ZYH33 Site: position = -239 score = 83.18 sequence = GTTATAATAGCTTTT... Gene: SSU05_1367: hypothetical protein |
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hypothetical protein |
| SP_1630 |
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Streptococcus pneumoniae TIGR4 Site: position = -168 score = 89.52 sequence = ATAATCCATAGAGAC... Gene: SP_1630: hypothetical protein |
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hypothetical protein |
| SGO_0777 |
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Streptococcus gordonii str. Challis substr. CH1 Site: position = -300 score = 63.68 sequence = TGTTTCCTAGAGACA... Gene: SGO_0777: hypothetical protein |
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hypothetical protein |
| SSA_1572 |
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Streptococcus sanguinis SK36 Site: position = -121 score = 64.26 sequence = CTATAATGTTTTCTA... Gene: SSA_1572: hypothetical protein |
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hypothetical protein |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |