Regulog T-box(Ser) - Streptococcaceae
| Regulator type: | RNA regulatory element |
| Name: | T-box |
| RFAM: | RF00230 |
| Regulation mode: | |
| Biological process: | Amino acid metabolism |
| Effector: | Ser-tRNA |
| Phylum: | Firmicutes |
Member of regulog collections
- By taxonomy - Streptococcaceae
- By RNA motif - T-box
- By effector - Ser-tRNA
- By pathway - Amino acid metabolism
| Genes | Function | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||||||
| serS |
*
Streptococcus pneumoniae TIGR4 Site: position = -205 score = 59.39 sequence = AGTATAATCATAGCA... Gene: SP_0411: Seryl-tRNA synthetase (EC 6.1.1.11) |
*
Streptococcus gallolyticus UCN34 Site: position = -240 score = 67.56 sequence = ATAAAGAGTACGGAT... Gene: GALLO_0346: Seryl-tRNA synthetase (EC 6.1.1.11) |
*
Streptococcus dysgalactiae subsp. equisimilis GGS_124 Site: position = -272 score = 75.44 sequence = ATAGTGCTAACGGAT... Gene: SDEG_1811: Seryl-tRNA synthetase (EC 6.1.1.11) |
*
Streptococcus suis 05ZYH33 Site: position = -79 score = 77.66 sequence = TATAATAGTAGAAAC... Gene: SSU05_1782: Seryl-tRNA synthetase (EC 6.1.1.11) |
*
Lactococcus lactis subsp. lactis Il1403 Site: position = -326 score = 74.49 sequence = TAAAATAAATCTAGA... Gene: L150515: Seryl-tRNA synthetase (EC 6.1.1.11) |
*
Lactococcus lactis subsp. cremoris SK11 Site: position = -337 score = 83.88 sequence = TAAAATAATTTTAGA... Gene: LACR_1870: Seryl-tRNA synthetase (EC 6.1.1.11) |
*
Streptococcus uberis 0140J Site: position = -207 score = 69.32 sequence = TAACATATCGGATAA... Gene: SUB1489: Seryl-tRNA synthetase (EC 6.1.1.11) |
*
Streptococcus agalactiae 2603V/R Site: position = -215 score = 75.11 sequence = TATAATAACCTTAAC... Gene: SAG0356: Seryl-tRNA synthetase (EC 6.1.1.11) |
*
Streptococcus sanguinis SK36 Site: position = -202 score = 78.79 sequence = TATAATAGTCGAAAC... Gene: SSA_1925: Seryl-tRNA synthetase (EC 6.1.1.11) |
*
Streptococcus pyogenes M1 GAS Site: position = -274 score = 66.97 sequence = TAATAGTCCTAACGG... Gene: SPy1742: Seryl-tRNA synthetase (EC 6.1.1.11) |
*
Streptococcus mutans UA159 Site: position = -377 score = 68.81 sequence = TAAGAACAACGGATA... Gene: SMU.1886: Seryl-tRNA synthetase (EC 6.1.1.11) |
*
Streptococcus thermophilus CNRZ1066 Site: position = -198 score = 63.23 sequence = ATGTAAAGGACGGAT... Gene: str0329: Seryl-tRNA synthetase (EC 6.1.1.11) |
*
Streptococcus gordonii str. Challis substr. CH1 Site: position = -202 score = 73.19 sequence = TATAATCTAGGAAAC... Gene: SGO_1683: Seryl-tRNA synthetase (EC 6.1.1.11) |
*
Streptococcus equi subsp. zooepidemicus MGCS10565 Site: position = -278 score = 69.24 sequence = TATAATAGGTCTAGC... Gene: Sez_0418: Seryl-tRNA synthetase (EC 6.1.1.11) |
*
Streptococcus mitis B6 Site: position = -204 score = 60.2 sequence = TATAATCATAGCAAC... Gene: smi_1689: Seryl-tRNA synthetase (EC 6.1.1.11) |
Seryl-tRNA synthetase (EC 6.1.1.11) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |