Regulog T-box(Phe) - Streptococcaceae
| Regulator type: | RNA regulatory element |
| Name: | T-box |
| RFAM: | RF00230 |
| Regulation mode: | |
| Biological process: | Amino acid metabolism |
| Effector: | Phe-tRNA |
| Phylum: | Firmicutes |
Member of regulog collections
- By taxonomy - Streptococcaceae
- By RNA motif - T-box
- By effector - Phe-tRNA
- By pathway - Amino acid metabolism
| Genes | Function | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||||||
| pheS |
*
Streptococcus pneumoniae TIGR4 Site: position = -218 score = 54.9 sequence = GAATCTGAAAGACTA... Gene: SP_0579: Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) |
*
Streptococcus gallolyticus UCN34 Site: position = -138 score = 41.43 sequence = TGTCTTATGAGACTA... Gene: GALLO_0799: Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) |
*
Streptococcus dysgalactiae subsp. equisimilis GGS_124 Site: position = -220 score = 49.77 sequence = AATAAGTGTCTATGA... Gene: SDEG_0733: Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) |
*
Streptococcus suis 05ZYH33 Site: position = -162 score = 23.01 sequence = AAAAACAGCCTTGAT... Gene: SSU05_1152: Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) |
*
Lactococcus lactis subsp. lactis Il1403 Site: position = -315 score = 54.06 sequence = CATAGATGTAAGAAG... Gene: L0354: Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) |
*
Lactococcus lactis subsp. cremoris SK11 Site: position = -351 score = 47.76 sequence = AATTAAGCTTATAAG... Gene: LACR_2201: Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) |
*
Streptococcus uberis 0140J Site: position = -220 score = 53.39 sequence = AGTCAGCAAGACTAG... Gene: SUB0678: Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) |
*
Streptococcus agalactiae 2603V/R Site: position = -227 score = 44.15 sequence = GGTCTGTGAGACTAG... Gene: SAG0869: Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) |
*
Streptococcus sanguinis SK36 Site: position = -205 score = 47.44 sequence = AATAGCAATCCGCAA... Gene: SSA_0912: Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) |
*
Streptococcus pyogenes M1 GAS Site: position = -220 score = 53.69 sequence = AATAAGTGTCTATGA... Gene: SPy_0768: Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) |
*
Streptococcus mutans UA159 Site: position = -232 score = 50.77 sequence = TAAAAGTCTATGAGA... Gene: SMU.1512: Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) |
*
Streptococcus thermophilus CNRZ1066 Site: position = -117 score = 19.4 sequence = AAGGTCTGGGAAACC... Gene: str1294: Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) |
*
Streptococcus gordonii str. Challis substr. CH1 Site: position = -199 score = 48.95 sequence = AATCCGCAAGACCAG... Gene: SGO_0859: Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) |
*
Streptococcus equi subsp. zooepidemicus MGCS10565 Site: position = -459 score = 40.92 sequence = GAATAGCAGTCTATG... Gene: Sez_0805: Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) |
*
Streptococcus mitis B6 Site: position = -139 score = 58.47 sequence = AGGAATCCGCAAGAC... Gene: smi_1803: Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) |
Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) |
| paiA |
Gene: SP_0580: acetyltransferase, GNAT family |
Gene: GALLO_0800: acetyltransferase, GNAT family |
|
Gene: SSU05_1151: acetyltransferase, GNAT family |
|
|
Gene: SUB0679: acetyltransferase, GNAT family |
Gene: SAG0870: acetyltransferase, GNAT family |
Gene: SSA_0913: acetyltransferase, GNAT family |
|
Gene: SMU.1511c: acetyltransferase, GNAT family |
Gene: str1293: acetyltransferase, GNAT family |
Gene: SGO_0860: acetyltransferase, GNAT family |
|
Gene: smi_1802: acetyltransferase, GNAT family |
acetyltransferase, GNAT family |
| pheT |
Gene: SP_0581: Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) |
Gene: GALLO_0801: Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) |
Gene: SDEG_0734: Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) |
Gene: SSU05_1150: Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) |
Gene: L0355: Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) |
Gene: LACR_2200: Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) |
Gene: SUB0680: Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) |
Gene: SAG0871: Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) |
Gene: SSA_0914: Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) |
Gene: SPy0769: Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) |
Gene: SMU.1510: Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) |
Gene: str1292: Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) |
Gene: SGO_0861: Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) |
Gene: Sez_0806: Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) |
Gene: smi_1801: Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) |
Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |