Regulog T-box(Phe) - Streptococcaceae

Properties
Regulator type:	RNA regulatory element
Name:	T-box
RFAM:	RF00230
Regulation mode:
Biological process:	Amino acid metabolism
Effector:	Phe-tRNA
Phylum:	Firmicutes

Member of regulog collections

By taxonomy - Streptococcaceae
By RNA motif - T-box
By effector - Phe-tRNA
By pathway - Amino acid metabolism

Statistics of regulated genes
Genome	Genes	Operons
Streptococcus pneumoniae TIGR4	3	1
Streptococcus gallolyticus UCN34	3	1
Streptococcus dysgalactiae subsp. equisimilis GGS_124	2	1
Streptococcus suis 05ZYH33	3	1
Lactococcus lactis subsp. lactis Il1403	2	1
Lactococcus lactis subsp. cremoris SK11	2	1
Streptococcus uberis 0140J	3	1
Streptococcus agalactiae 2603V/R	3	1
Streptococcus sanguinis SK36	3	1
Streptococcus pyogenes M1 GAS	2	1
Streptococcus mutans UA159	3	1
Streptococcus thermophilus CNRZ1066	3	1
Streptococcus gordonii str. Challis substr. CH1	3	1
Streptococcus equi subsp. zooepidemicus MGCS10565	2	1
Streptococcus mitis B6	3	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes																Function

CRON 1.
pheS	* Streptococcus pneumoniae TIGR4 Site: position = -218 score = 54.9 sequence = GAATCTGAAAGACTA... Gene: SP_0579: Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	* Streptococcus gallolyticus UCN34 Site: position = -138 score = 41.43 sequence = TGTCTTATGAGACTA... Gene: GALLO_0799: Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	* Streptococcus dysgalactiae subsp. equisimilis GGS_124 Site: position = -220 score = 49.77 sequence = AATAAGTGTCTATGA... Gene: SDEG_0733: Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	* Streptococcus suis 05ZYH33 Site: position = -162 score = 23.01 sequence = AAAAACAGCCTTGAT... Gene: SSU05_1152: Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	* Lactococcus lactis subsp. lactis Il1403 Site: position = -315 score = 54.06 sequence = CATAGATGTAAGAAG... Gene: L0354: Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	* Lactococcus lactis subsp. cremoris SK11 Site: position = -351 score = 47.76 sequence = AATTAAGCTTATAAG... Gene: LACR_2201: Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	* Streptococcus uberis 0140J Site: position = -220 score = 53.39 sequence = AGTCAGCAAGACTAG... Gene: SUB0678: Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	* Streptococcus agalactiae 2603V/R Site: position = -227 score = 44.15 sequence = GGTCTGTGAGACTAG... Gene: SAG0869: Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	* Streptococcus sanguinis SK36 Site: position = -205 score = 47.44 sequence = AATAGCAATCCGCAA... Gene: SSA_0912: Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	* Streptococcus pyogenes M1 GAS Site: position = -220 score = 53.69 sequence = AATAAGTGTCTATGA... Gene: SPy_0768: Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	* Streptococcus mutans UA159 Site: position = -232 score = 50.77 sequence = TAAAAGTCTATGAGA... Gene: SMU.1512: Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	* Streptococcus thermophilus CNRZ1066 Site: position = -117 score = 19.4 sequence = AAGGTCTGGGAAACC... Gene: str1294: Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	* Streptococcus gordonii str. Challis substr. CH1 Site: position = -199 score = 48.95 sequence = AATCCGCAAGACCAG... Gene: SGO_0859: Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	* Streptococcus equi subsp. zooepidemicus MGCS10565 Site: position = -459 score = 40.92 sequence = GAATAGCAGTCTATG... Gene: Sez_0805: Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	* Streptococcus mitis B6 Site: position = -139 score = 58.47 sequence = AGGAATCCGCAAGAC... Gene: smi_1803: Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)
paiA	Streptococcus pneumoniae TIGR4 Gene: SP_0580: acetyltransferase, GNAT family	Streptococcus gallolyticus UCN34 Gene: GALLO_0800: acetyltransferase, GNAT family	Streptococcus dysgalactiae subsp. equisimilis GGS_124	Streptococcus suis 05ZYH33 Gene: SSU05_1151: acetyltransferase, GNAT family	Lactococcus lactis subsp. lactis Il1403	Lactococcus lactis subsp. cremoris SK11	Streptococcus uberis 0140J Gene: SUB0679: acetyltransferase, GNAT family	Streptococcus agalactiae 2603V/R Gene: SAG0870: acetyltransferase, GNAT family	Streptococcus sanguinis SK36 Gene: SSA_0913: acetyltransferase, GNAT family	Streptococcus pyogenes M1 GAS	Streptococcus mutans UA159 Gene: SMU.1511c: acetyltransferase, GNAT family	Streptococcus thermophilus CNRZ1066 Gene: str1293: acetyltransferase, GNAT family	Streptococcus gordonii str. Challis substr. CH1 Gene: SGO_0860: acetyltransferase, GNAT family	Streptococcus equi subsp. zooepidemicus MGCS10565	Streptococcus mitis B6 Gene: smi_1802: acetyltransferase, GNAT family	acetyltransferase, GNAT family
pheT	Streptococcus pneumoniae TIGR4 Gene: SP_0581: Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	Streptococcus gallolyticus UCN34 Gene: GALLO_0801: Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	Streptococcus dysgalactiae subsp. equisimilis GGS_124 Gene: SDEG_0734: Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	Streptococcus suis 05ZYH33 Gene: SSU05_1150: Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	Lactococcus lactis subsp. lactis Il1403 Gene: L0355: Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	Lactococcus lactis subsp. cremoris SK11 Gene: LACR_2200: Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	Streptococcus uberis 0140J Gene: SUB0680: Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	Streptococcus agalactiae 2603V/R Gene: SAG0871: Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	Streptococcus sanguinis SK36 Gene: SSA_0914: Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	Streptococcus pyogenes M1 GAS Gene: SPy0769: Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	Streptococcus mutans UA159 Gene: SMU.1510: Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	Streptococcus thermophilus CNRZ1066 Gene: str1292: Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	Streptococcus gordonii str. Challis substr. CH1 Gene: SGO_0861: Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	Streptococcus equi subsp. zooepidemicus MGCS10565 Gene: Sez_0806: Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	Streptococcus mitis B6 Gene: smi_1801: Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog T-box(Phe) - Streptococcaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --